SSDB Motif Search Result


Organism : Nitrobacter hamburgensis
Gene : Nham_0448
Definition : ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N2104 3.2e-37-
pf:DNA_ligase_A_M240409ATP dependent DNA ligase domain 3.4e-24-
pf:DNA_ligase_A_C425519ATP dependent DNA ligase C terminal region 5.2e-20-
pf:Hjc611676Archaeal holliday junction resolvase (hjc) 0.051-
pf:DNA_primase_S695820Eukaryotic and archaeal DNA primase small subunit 0.046-

nha:Nham_0448 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Hjc pf:DNA_primase_S


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