SSDB Motif Search Result


Organism : Nitrobacter hamburgensis
Gene : Nham_0448
Definition : ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N2103 1.2e-36-
pf:DNA_ligase_A_M240409ATP dependent DNA ligase domain 3.4e-24-
pf:DNA_ligase_A_C425519ATP dependent DNA ligase C terminal region 5.3e-20-
pf:Hjc611676Archaeal holliday junction resolvase (hjc) 0.051-
pf:DNA_primase_S695820Eukaryotic and archaeal DNA primase small subunit 0.15-

nha:Nham_0448 pf:LigD_N pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:Hjc pf:DNA_primase_S


[ GENES | KEGG2 | KEGG | GenomeNet ]