SSDB Motif Search Result
Organism :
Pseudomonas putida BIRD-1
Gene :
PPUBIRD1_2515
Definition :
K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ligD; LigD
Motif id
From
To
Definition
E value
Score
pf:LigD_N
38
141
DNA polymerase Ligase (LigD)
4.6e-40
-
pf:DNA_ligase_A_M
217
399
ATP dependent DNA ligase domain
2.5e-27
-
pf:DNA_ligase_A_C
418
514
ATP dependent DNA ligase C terminal region
1.3e-22
-
pf:DNA_primase_S
664
727
DNA primase small subunit
2e-05
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]