SSDB Motif Search Result


Organism : Pseudomonas putida BIRD-1
Gene : PPUBIRD1_2515
Definition : ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N38142 7.9e-44-
pf:DNA_ligase_A_M225399ATP dependent DNA ligase domain 6.5e-31-
pf:mRNA_cap_enzyme237343mRNA capping enzyme, catalytic domain 0.016-
pf:DNA_ligase_A_C418514ATP dependent DNA ligase C terminal region 1.3e-27-
pf:DNA_primase_S670781Eukaryotic and archaeal DNA primase small subunit 0.00024-

ppb:PPUBIRD1_2515 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:DNA_primase_S

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