SSDB Motif Search Result
Organism :
Pseudomonas putida F1
Gene :
Pput_4536
Definition :
K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
Motif id
From
To
Definition
E value
Score
pf:RecD_N
37
155
2.1e-10
-
pf:AAA_19
204
356
AAA domain
2.8e-33
-
pf:T2SSE
204
240
Type II/IV secretion system protein
0.047
-
pf:AAA_30
209
371
AAA domain
1.1e-26
-
pf:nSTAND3
211
236
0.044
-
pf:AAA_11
212
270
AAA domain
2.1e-06
-
pf:PhoH
212
354
PhoH-like protein
0.71
-
pf:AAA_22
213
337
AAA domain
2.4e-08
-
pf:UvrD-helicase
213
295
UvrD/REP helicase N-terminal domain
3.9e-05
-
pf:AAA_16
213
371
AAA ATPase domain
0.0023
-
pf:NACHT
217
274
NACHT domain
0.4
-
pf:Helicase_RecD
218
337
Helicase
2.7e-09
-
pf:SLFN-g3_helicase
218
324
0.01
-
pf:AAA_28
218
243
AAA domain
0.02
-
pf:NTPase_1
218
240
NTPase
0.14
-
pf:AAA_5
218
242
AAA domain (dynein-related subfamily)
0.43
-
pf:AAA_18
218
236
AAA domain
0.94
-
pf:AAA_17
220
283
AAA domain
0.051
-
pf:AAA_11
301
355
AAA domain
0.02
-
pf:SH3_13
534
595
2.9e-08
-
pf:UvrD_C_2
618
660
UvrD-like helicase C-terminal domain
1.8e-10
-
pf:Viral_helicase1
620
664
Viral (Superfamily 1) RNA helicase
0.00094
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]