SSDB Motif Search Result


Organism : Pseudomonas putida GB-1
Gene : PputGB1_2635
Definition : ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N38142 4.9e-44-
pf:DNA_ligase_A_M225399ATP dependent DNA ligase domain 4.8e-29-
pf:mRNA_cap_enzyme237342mRNA capping enzyme, catalytic domain 0.21-
pf:DNA_ligase_A_C418514ATP dependent DNA ligase C terminal region 7.9e-28-
pf:YjeF_N510587YjeF-related protein N-terminus 0.089-
pf:DNA_primase_S666733Eukaryotic and archaeal DNA primase small subunit 0.0045-

ppg:PputGB1_2635 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:YjeF_N pf:DNA_primase_S


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