SSDB Motif Search Result
Organism :
Pseudomonas putida ND6
Gene :
YSA_10746
Definition :
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Motif id
From
To
Definition
E value
Score
pf:LigD_N
38
142
2.4e-43
-
pf:DNA_ligase_A_M
225
399
ATP dependent DNA ligase domain
9.7e-31
-
pf:mRNA_cap_enzyme
237
343
mRNA capping enzyme, catalytic domain
0.019
-
pf:DUF3473
319
355
Domain of unknown function (DUF3473)
0.12
-
pf:DNA_ligase_A_C
418
514
ATP dependent DNA ligase C terminal region
1.2e-27
-
pf:DNA_primase_S
670
781
Eukaryotic and archaeal DNA primase small subunit
0.00026
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]