SSDB Motif Search Result
Organism :
Pseudomonas putida NBRC 14164
Gene :
PP4_30630
Definition :
K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ligD; DNA ligase D
Motif id
From
To
Definition
E value
Score
pf:LigD_N
38
143
DNA polymerase Ligase (LigD)
9.4e-45
-
pf:DNA_ligase_A_M
223
393
ATP dependent DNA ligase domain
1.2e-28
-
pf:RNA_ligase
227
392
RNA ligase
0.062
-
pf:DNA_ligase_A_C
412
508
ATP dependent DNA ligase C terminal region
1.4e-27
-
pf:LigD_Prim-Pol
552
801
4.7e-85
-
pf:DNA_primase_S
652
771
DNA primase small subunit
7.7e-07
-
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GENES
|
KEGG2
|
KEGG
|
GenomeNet
]