SSDB Motif Search Result


Organism : Pseudomonas stutzeri DSM 10701
Gene : PSJM300_09695
Definition : ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:LigD_N37142 1.9e-43-
pf:DNA_ligase_A_M228413ATP dependent DNA ligase domain 2.4e-30-
pf:mRNA_cap_enzyme251357mRNA capping enzyme, catalytic domain 0.24-
pf:RIIa356373Regulatory subunit of type II PKA R-subunit 0.34-
pf:DNA_ligase_A_C432527ATP dependent DNA ligase C terminal region 6.2e-30-
pf:DNA_primase_S677787Eukaryotic and archaeal DNA primase small subunit 4e-07-

psj:PSJM300_09695 pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:RIIa pf:DNA_ligase_A_C pf:DNA_primase_S

[ GENES | KEGG2 | KEGG | GenomeNet ]