| Motif id | From | To | Definition | E value | Score |
| pf:LigD_N | 37 | 142 | | 1.3e-42 | - |
| pf:DNA_ligase_A_M | 259 | 429 | ATP dependent DNA ligase domain
| 3.2e-22 | - |
| pf:DNA_ligase_A_C | 445 | 539 | ATP dependent DNA ligase C terminal region
| 7.4e-24 | - |
| pf:Crp | 473 | 485 | Bacterial regulatory proteins, crp family
| 0.36 | - |