| Motif id | From | To | Definition | E value | Score |
| pf:HTH_26 | 1 | 26 | Cro/C1-type HTH DNA-binding domain
| 0.16 | - |
| pf:HTH_Tnp_ISL3 | 3 | 25 | Helix-turn-helix domain of transposase family ISL3
| 0.068 | - |
| pf:HTH_28 | 4 | 26 | Helix-turn-helix domain
| 0.0062 | - |
| pf:HTH_Tnp_4 | 5 | 25 | Helix-turn-helix of DDE superfamily endonuclease
| 0.075 | - |
| pf:HTH_17 | 6 | 54 | Helix-turn-helix domain
| 9.1e-10 | - |
| pf:HTH_23 | 6 | 31 | Homeodomain-like domain
| 0.001 | - |
| pf:MerR_1 | 9 | 52 | MerR HTH family regulatory protein
| 0.057 | - |
| pf:ANAPC_CDC26 | 45 | 59 | Anaphase-promoting complex APC subunit CDC26
| 0.6 | - |