SSDB Motif Search Result
Organism :
Rhodococcus erythropolis
Gene :
RER_45220
Definition :
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
Motif id
From
To
Definition
E value
Score
pf:DNA_primase_S
137
253
Eukaryotic and archaeal DNA primase small subunit
9.5e-08
-
pf:LigD_N
332
432
4.3e-39
-
pf:DNA_ligase_A_M
460
635
ATP dependent DNA ligase domain
2.2e-29
-
pf:DNA_ligase_A_C
654
749
ATP dependent DNA ligase C terminal region
1.2e-27
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]