SSDB Motif Search Result


Organism : Rhizobium etli CFN 42
Gene : RHE_CH00617
Definition : DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:DUF2967869Protein of unknown function (DUF2967) 0.79-
pf:DNA_ligase_A_M70239ATP dependent DNA ligase domain 8.7e-23-
pf:DNA_ligase_A_C259352ATP dependent DNA ligase C terminal region 1.5e-23-
pf:NdhM487508Cyanobacterial and plastid NDH-1 subunit M 0.1-
pf:DNA_primase_S495615Eukaryotic and archaeal DNA primase small subunit 0.03-

ret:RHE_CH00617 pf:DUF2967 pf:DNA_ligase_A_M pf:DNA_ligase_A_C pf:NdhM pf:DNA_primase_S


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