SSDB Motif Search Result

Organism : Rhizobium etli CFN 42
Gene : RHE_CH00617
Definition : putative DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:]
Motif idFromToDefinitionE valueScore
pf:DUF2967869Protein of unknown function (DUF2967) 0.79-
pf:DNA_ligase_A_M70239ATP dependent DNA ligase domain 8.8e-23-
pf:RNA_ligase72239RNA ligase 0.0012-
pf:DNA_ligase_A_C259352ATP dependent DNA ligase C terminal region 2.4e-23-
pf:NdhM487508Cyanobacterial and plastid NDH-1 subunit M 0.1-
pf:DNA_primase_S495545Eukaryotic and archaeal DNA primase small subunit 0.82-

ret:RHE_CH00617 pf:DUF2967 pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C pf:NdhM pf:DNA_primase_S

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