| Motif id | From | To | Definition | E value | Score |
| pf:DNA_ligase_A_M | 58 | 239 | ATP dependent DNA ligase domain
| 1.6e-25 | - |
| pf:DNA_ligase_A_C | 259 | 352 | ATP dependent DNA ligase C terminal region
| 2.3e-25 | - |
| pf:NdhM | 485 | 508 | Cyanobacterial and plastid NDH-1 subunit M
| 0.038 | - |
| pf:DNA_primase_S | 494 | 615 | Eukaryotic and archaeal DNA primase small subunit
| 4.8e-06 | - |