SSDB Motif Search Result


Organism : Rhodococcus sp. B7740
Gene : NY08_3398
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ATP-dependent DNA ligase clustered with Ku protein, LigD
Motif idFromToDefinitionE valueScore
pf:LigD_Prim-Pol27279 1.6e-87-
pf:DNA_primase_S132253DNA primase small subunit 1.6e-09-
pf:LigD_N332432DNA polymerase Ligase (LigD) 1.1e-40-
pf:DNA_ligase_A_M457634ATP dependent DNA ligase domain 1e-29-
pf:mRNA_cap_enzyme477578mRNA capping enzyme, catalytic domain 0.012-
pf:DNA_ligase_A_C653748ATP dependent DNA ligase C terminal region 1e-28-

rhb:NY08_3398 pf:LigD_Prim-Pol pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:mRNA_cap_enzyme pf:DNA_ligase_A_C

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