SSDB Motif Search Result


Organism : Rhodococcus opacus B4
Gene : ROP_51120
Definition : ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Motif idFromToDefinitionE valueScore
pf:DNA_primase_S160198Eukaryotic and archaeal DNA primase small subunit 0.46-
pf:LigD_N329428 2.2e-37-
pf:DNA_ligase_A_M459634ATP dependent DNA ligase domain 4.6e-29-
pf:RNA_ligase507634RNA ligase 2e-08-
pf:DNA_ligase_A_C654748ATP dependent DNA ligase C terminal region 2.9e-27-

rop:ROP_51120 pf:DNA_primase_S pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_A_C


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