| Motif id | From | To | Definition | E value | Score |
| pf:DNA_ligase_A_N | 20 | 215 | DNA ligase N terminus
| 2.9e-14 | - |
| pf:Fve | 217 | 266 | Fungal immunomodulatory protein Fve
| 0.33 | - |
| pf:DNA_ligase_A_M | 256 | 466 | ATP dependent DNA ligase domain
| 1.3e-53 | - |
| pf:mRNA_cap_enzyme | 376 | 413 | mRNA capping enzyme, catalytic domain
| 1 | - |
| pf:DNA_ligase_A_C | 532 | 627 | ATP dependent DNA ligase C terminal region
| 0.00056 | - |
| pf:BRCT | 683 | 767 | BRCA1 C Terminus (BRCT) domain
| 2.6e-11 | - |
| pf:BRCT | 840 | 928 | BRCA1 C Terminus (BRCT) domain
| 3.9e-05 | - |