SSDB Motif Search Result


Organism : Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Gene : SP_0401
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) putative helicase
Motif idFromToDefinitionE valueScore
pf:HHH_597136Helix-hairpin-helix domain 0.053-
pf:5_3_exonuc971345'-3' exonuclease, C-terminal SAM fold 0.13-
pf:HHH_498123Helix-hairpin-helix containing domain 0.54-
pf:DNA_pol_lambd_f98126Fingers domain of DNA polymerase lambda 0.76-
pf:HHH_4148237Helix-hairpin-helix containing domain 1.1e-26-
pf:RsgA_GTPase279367 0.021-
pf:AAA_11332395AAA domain 3.2e-05-
pf:AAA_30333519AAA domain 6.3e-38-
pf:UvrD-helicase334401UvrD/REP helicase N-terminal domain 0.00013-
pf:DEAD334480DEAD/DEAH box helicase 0.00016-
pf:AAA_19336473AAA domain 1.5e-40-
pf:T2SSE337367Type II/IV secretion system protein 0.14-
pf:nSTAND3344379 0.0086-
pf:AAA_29346369P-loop containing region of AAA domain 0.13-
pf:AAA_25346391AAA domain 0.41-
pf:AAA_22347464AAA domain 0.051-
pf:SLFN-g3_helicase347368 0.23-
pf:NTPase_1349368NTPase 0.5-
pf:AAA_28349365AAA domain 0.08-
pf:AAA350368ATPase family associated with various cellular activities (AAA) 0.55-
pf:Viral_helicase1351473Viral (Superfamily 1) RNA helicase 0.033-
pf:SH3_13574644 1.3e-15-
pf:Herpes_Helicase654707Helicase 0.4-
pf:Viral_helicase1655709Viral (Superfamily 1) RNA helicase 3.5e-05-
pf:UvrD_C_2661709UvrD-like helicase C-terminal domain 7.7e-19-
pf:UvrD_C665708UvrD-like helicase C-terminal domain 0.0002-
pf:AAA_12665711AAA domain 0.18-

spn:SP_0401 pf:HHH_5 pf:5_3_exonuc pf:HHH_4 pf:DNA_pol_lambd_f pf:HHH_4 pf:RsgA_GTPase pf:AAA_11 pf:AAA_30 pf:UvrD-helicase pf:DEAD pf:AAA_19 pf:T2SSE pf:nSTAND3 pf:AAA_29 pf:AAA_25 pf:AAA_22 pf:SLFN-g3_helicase pf:NTPase_1 pf:AAA_28 pf:AAA pf:Viral_helicase1 pf:SH3_13 pf:Herpes_Helicase pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C pf:AAA_12

[ GENES | KEGG2 | KEGG | GenomeNet ]