SSDB Motif Search Result
Organism :
Stigmatella aurantiaca
Gene :
STAUR_6997
Definition :
ligD; ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Motif id
From
To
Definition
E value
Score
pf:LigD_N
41
148
3.2e-40
-
pf:DNA_ligase_A_M
215
392
ATP dependent DNA ligase domain
1.4e-29
-
pf:mRNA_cap_enzyme
236
337
mRNA capping enzyme, catalytic domain
0.002
-
pf:DNA_ligase_A_C
413
504
ATP dependent DNA ligase C terminal region
5.5e-26
-
pf:DNA_ligase_OB_2
414
501
0.00073
-
pf:DNA_primase_S
677
794
Eukaryotic and archaeal DNA primase small subunit
9.2e-06
-
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KEGG2
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KEGG
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