| Motif id | From | To | Definition | E value | Score |
| pf:CPSase_sm_chain | 4 | 138 | Carbamoyl-phosphate synthase small chain, CPSase domain
| 3.2e-47 | - |
| pf:GATase | 181 | 356 | Glutamine amidotransferase class-I
| 5.6e-49 | - |
| pf:Peptidase_C26 | 245 | 305 | Peptidase C26
| 0.0021 | - |
| pf:CPSase_L_D2 | 515 | 717 | Carbamoyl-phosphate synthase L chain, ATP binding domain
| 6.2e-83 | - |
| pf:ATP-grasp | 526 | 675 | ATP-grasp domain
| 2.7e-05 | - |
| pf:Dala_Dala_lig_C | 540 | 686 | D-ala D-ala ligase C-terminus
| 4.3e-10 | - |
| pf:ATP-grasp_3 | 636 | 689 | ATP-grasp domain
| 0.73 | - |
| pf:ATPgrasp_Ter | 651 | 714 | ATP-grasp in the biosynthetic pathway with Ter operon
| 0.008 | - |
| pf:CPSase_L_D3 | 803 | 881 | Carbamoyl-phosphate synthetase large chain, oligomerisation domain
| 3.5e-26 | - |
| pf:ATP-grasp_3 | 1050 | 1223 | ATP-grasp domain
| 0.073 | - |
| pf:GARS_A | 1057 | 1223 | Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
| 0.012 | - |
| pf:ATP-grasp | 1061 | 1223 | ATP-grasp domain
| 5.2e-10 | - |
| pf:Dala_Dala_lig_C | 1067 | 1221 | D-ala D-ala ligase C-terminus
| 2.7e-06 | - |
| pf:CPSase_L_D2 | 1070 | 1251 | Carbamoyl-phosphate synthase L chain, ATP binding domain
| 1.3e-25 | - |
| pf:GSH-S_ATP | 1079 | 1203 | Prokaryotic glutathione synthetase, ATP-grasp domain
| 0.085 | - |
| pf:ATPgrasp_Ter | 1135 | 1251 | ATP-grasp in the biosynthetic pathway with Ter operon
| 6.8e-05 | - |
| pf:MGS | 1331 | 1434 | MGS-like domain
| 6.9e-18 | - |
| pf:Amidohydro_1 | 1471 | 1520 | Amidohydrolase family
| 1.3e-07 | - |
| pf:OTCace_N | 1955 | 2096 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
| 2.9e-44 | - |
| pf:OTCace | 2103 | 2251 | Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
| 1.7e-34 | - |