| Motif id | From | To | Definition | E value | Score |
| pf:PilJ | 162 | 220 | | 0.31 | - |
| pf:PEPcase | 164 | 321 | Phosphoenolpyruvate carboxylase
| 4.6e-39 | - |
| pf:PEPcase | 499 | 813 | Phosphoenolpyruvate carboxylase
| 5.3e-78 | - |
| pf:PCP | 542 | 583 | Peridinin-chlorophyll A binding protein
| 0.19 | - |
| pf:PEPcase_2 | 659 | 751 | | 0.0054 | - |
| pf:PEPcase | 910 | 1136 | Phosphoenolpyruvate carboxylase
| 4.6e-68 | - |