| Entry | SW_score | bits | identity | overlap |
| cre:CHLRE_16g673852v5 | 1385 | 321.5 | 0.344 | 951 |
| cre:CHLRE_11g476325v5 | 1295 | 301.0 | 0.338 | 925 |
| cre:CHLRE_03g171950v5 | 1267 | 294.6 | 0.386 | 630 |
| cre:CHLRE_10g418250v5 | 201 | 51.6 | 0.243 | 803 |
| cre:CHLRE_05g236050v5 | 199 | 51.2 | 0.255 | 609 |
| cre:CHLRE_16g656950v5 | 172 | 45.0 | 0.255 | 537 |
| cre:CHLRE_12g495800v5 | 168 | 44.1 | 0.251 | 383 |
| cre:CHLRE_07g336750v5 | 151 | 40.2 | 0.250 | 696 |
| cre:CHLRE_13g576250v5 | 127 | 34.7 | 0.312 | 96 |
| cre:CHLRE_02g093550v5 | 111 | 31.1 | 0.652 | 23 |
| cre:CHLRE_16g688900v5 | 107 | 30.2 | 0.316 | 136 |
| cre:CHLRE_05g239950v5 | 107 | 30.2 | 0.316 | 98 |
| cre:CHLRE_03g156550v5 | 107 | 30.2 | 0.306 | 134 |
| cre:CHLRE_14g615900v5 | 104 | 29.5 | 0.396 | 53 |
| cre:CHLRE_06g258400v5 | 103 | 29.3 | 0.353 | 51 |
| cre:CHLRE_01g009731v5 | 102 | 29.0 | 0.302 | 116 |
| cre:CHLRE_03g186250v5 | 101 | 28.8 | 0.338 | 65 |
| cre:CHLRE_11g467675v5 | 100 | 28.6 | 0.397 | 58 |
| cre:CHLRE_17g745797v5 | 100 | 28.6 | 0.341 | 88 |
| cre:CHLRE_17g745947v5 | 100 | 28.6 | 0.330 | 88 |
| cre:CHLRE_01g031951v5 | 100 | 28.6 | 0.326 | 89 |
| cre:CHLRE_04g220750v5 | 100 | 28.6 | 0.319 | 119 |