| Entry | SW_score | bits | identity | overlap |
| rpu:CDC45_01420 | 1896 | 438.0 | 0.702 | 393 |
| rpu:CDC45_08410 | 1170 | 272.5 | 0.478 | 393 |
| rpu:CDC45_08435 | 905 | 212.1 | 0.391 | 396 |
| rpu:CDC45_11490 | 820 | 192.7 | 0.367 | 395 |
| rpu:CDC45_02435 | 687 | 162.4 | 0.345 | 403 |
| rpu:CDC45_09075 | 674 | 159.4 | 0.337 | 404 |