| Entry | SW_score | bits | identity | overlap |
| ppa:PAS_chr4_0356 | 313 | 77.1 | 0.299 | 328 |
| ppa:PAS_chr2-1_0601 | 168 | 44.1 | 0.309 | 178 |
| ppa:PAS_chr2-2_0498 | 164 | 43.2 | 0.333 | 144 |
| ppa:PAS_FragB_0013 | 159 | 42.0 | 0.337 | 104 |
| ppa:PAS_chr3_0727 | 154 | 40.9 | 0.269 | 286 |
| ppa:PAS_chr4_0490 | 130 | 35.4 | 0.306 | 124 |
| ppa:PAS_chr3_0497 | 125 | 34.3 | 0.333 | 78 |