| Entry | SW_score | bits | identity | overlap |
| pmad:BAY61_21925 | 929 | 217.6 | 0.359 | 537 |
| pmad:BAY61_29150 | 819 | 192.5 | 0.307 | 580 |
| pmad:BAY61_27115 | 720 | 169.9 | 0.283 | 586 |
| pmad:BAY61_10305 | 653 | 154.6 | 0.315 | 499 |
| pmad:BAY61_11020 | 641 | 151.9 | 0.299 | 542 |
| pmad:BAY61_18490 | 622 | 147.6 | 0.317 | 511 |
| pmad:BAY61_27985 | 620 | 147.1 | 0.295 | 536 |
| pmad:BAY61_12055 | 614 | 145.8 | 0.289 | 519 |
| pmad:BAY61_05975 | 597 | 141.9 | 0.294 | 548 |
| pmad:BAY61_10220 | 593 | 141.0 | 0.286 | 500 |
| pmad:BAY61_23020 | 593 | 141.0 | 0.275 | 509 |
| pmad:BAY61_10195 | 592 | 140.7 | 0.289 | 533 |
| pmad:BAY61_03050 | 590 | 140.3 | 0.313 | 520 |
| pmad:BAY61_06220 | 584 | 138.9 | 0.307 | 521 |
| pmad:BAY61_22520 | 575 | 136.9 | 0.285 | 551 |
| pmad:BAY61_10230 | 574 | 136.6 | 0.316 | 535 |
| pmad:BAY61_17875 | 573 | 136.4 | 0.298 | 523 |
| pmad:BAY61_27650 | 572 | 136.2 | 0.295 | 543 |
| pmad:BAY61_16085 | 554 | 132.1 | 0.289 | 505 |
| pmad:BAY61_04215 | 537 | 128.2 | 0.309 | 534 |
| pmad:BAY61_01970 | 535 | 127.7 | 0.293 | 505 |
| pmad:BAY61_16235 | 535 | 127.7 | 0.282 | 549 |
| pmad:BAY61_09375 | 531 | 126.8 | 0.286 | 528 |
| pmad:BAY61_24885 | 525 | 125.5 | 0.281 | 513 |
| pmad:BAY61_19190 | 517 | 123.6 | 0.275 | 494 |
| pmad:BAY61_24645 | 513 | 122.7 | 0.297 | 538 |
| pmad:BAY61_01785 | 511 | 122.3 | 0.307 | 566 |
| pmad:BAY61_24610 | 508 | 121.6 | 0.279 | 544 |
| pmad:BAY61_20755 | 496 | 118.9 | 0.251 | 521 |
| pmad:BAY61_01285 | 495 | 118.6 | 0.246 | 578 |
| pmad:BAY61_27280 | 494 | 118.4 | 0.266 | 523 |
| pmad:BAY61_21490 | 488 | 117.0 | 0.246 | 541 |
| pmad:BAY61_11785 | 484 | 116.1 | 0.276 | 529 |
| pmad:BAY61_27685 | 470 | 112.9 | 0.260 | 554 |
| pmad:BAY61_19425 | 465 | 111.8 | 0.270 | 567 |
| pmad:BAY61_03865 | 456 | 109.7 | 0.284 | 546 |
| pmad:BAY61_22290 | 456 | 109.7 | 0.269 | 527 |
| pmad:BAY61_11030 | 455 | 109.5 | 0.267 | 546 |
| pmad:BAY61_01505 | 454 | 109.3 | 0.287 | 561 |
| pmad:BAY61_22270 | 444 | 107.0 | 0.279 | 555 |
| pmad:BAY61_06755 | 434 | 104.7 | 0.282 | 543 |
| pmad:BAY61_13245 | 427 | 103.1 | 0.254 | 485 |
| pmad:BAY61_15980 | 414 | 100.2 | 0.262 | 564 |
| pmad:BAY61_31155 | 403 | 97.7 | 0.265 | 528 |
| pmad:BAY61_16285 | 386 | 93.8 | 0.255 | 510 |
| pmad:BAY61_10675 | 373 | 90.8 | 0.256 | 504 |
| pmad:BAY61_21115 | 369 | 89.9 | 0.263 | 510 |
| pmad:BAY61_03685 | 350 | 85.6 | 0.272 | 493 |
| pmad:BAY61_02105 | 348 | 85.1 | 0.298 | 376 |
| pmad:BAY61_13175 | 337 | 82.6 | 0.261 | 524 |
| pmad:BAY61_25055 | 302 | 74.6 | 0.245 | 518 |
| pmad:BAY61_00815 | 246 | 61.9 | 0.250 | 368 |
| pmad:BAY61_27010 | 215 | 54.8 | 0.236 | 573 |
| pmad:BAY61_11345 | 210 | 53.7 | 0.248 | 424 |
| pmad:BAY61_31120 | 208 | 53.2 | 0.231 | 489 |
| pmad:BAY61_09825 | 108 | 30.4 | 0.313 | 115 |
| pmad:BAY61_23895 | 103 | 29.3 | 0.404 | 52 |
| pmad:BAY61_29540 | 100 | 28.6 | 0.319 | 94 |