| Entry | SW_score | bits | identity | overlap |
| cyp:PCC8801_1944 | 358 | 87.4 | 0.251 | 402 |
| cyp:PCC8801_1394 | 253 | 63.5 | 0.236 | 564 |
| cyp:PCC8801_0647 | 245 | 61.6 | 0.241 | 532 |
| cyp:PCC8801_1045 | 218 | 55.5 | 0.246 | 426 |
| cyp:PCC8801_4158 | 191 | 49.3 | 0.417 | 84 |
| cyp:PCC8801_2728 | 187 | 48.4 | 0.257 | 175 |
| cyp:PCC8801_0452 | 184 | 47.7 | 0.263 | 247 |
| cyp:PCC8801_2353 | 164 | 43.2 | 0.255 | 247 |