| Entry | SW_score | bits | identity | overlap |
| ctt:CtCNB1_1397 | 2217 | 511.2 | 0.516 | 659 |
| ctt:CtCNB1_2278 | 1519 | 352.0 | 0.375 | 634 |
| ctt:CtCNB1_0087 | 802 | 188.6 | 0.282 | 638 |
| ctt:CtCNB1_1217 | 713 | 168.3 | 0.265 | 608 |
| ctt:CtCNB1_4404 | 573 | 136.4 | 0.263 | 537 |
| ctt:CtCNB1_0097 | 551 | 131.4 | 0.283 | 552 |
| ctt:CtCNB1_4793 | 531 | 126.8 | 0.268 | 537 |
| ctt:CtCNB1_2123 | 518 | 123.9 | 0.268 | 557 |
| ctt:CtCNB1_0394 | 484 | 116.1 | 0.248 | 541 |
| ctt:CtCNB1_1340 | 455 | 109.5 | 0.265 | 554 |
| ctt:CtCNB1_1709 | 402 | 97.4 | 0.239 | 523 |
| ctt:CtCNB1_3751 | 396 | 96.1 | 0.226 | 521 |
| ctt:CtCNB1_1360 | 390 | 94.7 | 0.244 | 550 |
| ctt:CtCNB1_1807 | 388 | 94.2 | 0.229 | 525 |
| ctt:CtCNB1_4619 | 380 | 92.4 | 0.250 | 544 |
| ctt:CtCNB1_4250 | 380 | 92.4 | 0.215 | 539 |
| ctt:CtCNB1_3350 | 378 | 92.0 | 0.254 | 520 |
| ctt:CtCNB1_2297 | 378 | 92.0 | 0.248 | 537 |
| ctt:CtCNB1_0011 | 376 | 91.5 | 0.229 | 515 |
| ctt:CtCNB1_0743 | 362 | 88.3 | 0.231 | 524 |
| ctt:CtCNB1_1301 | 344 | 84.2 | 0.231 | 536 |
| ctt:CtCNB1_0501 | 323 | 79.4 | 0.244 | 550 |
| ctt:CtCNB1_1197 | 318 | 78.3 | 0.235 | 541 |
| ctt:CtCNB1_2963 | 318 | 78.3 | 0.225 | 546 |
| ctt:CtCNB1_1724 | 313 | 77.1 | 0.219 | 515 |
| ctt:CtCNB1_1726 | 308 | 76.0 | 0.221 | 524 |
| ctt:CtCNB1_1336 | 254 | 63.7 | 0.232 | 500 |