| Entry | SW_score | bits | identity | overlap |
| smx:SM11_pC1351 | 1541 | 357.1 | 0.667 | 339 |
| smx:SM11_chr2853 | 602 | 143.0 | 0.317 | 334 |
| smx:SM11_chr0629 | 575 | 136.9 | 0.342 | 336 |
| smx:SM11_chr3018 | 548 | 130.7 | 0.318 | 377 |
| smx:SM11_pC0875 | 481 | 115.4 | 0.284 | 352 |
| smx:SM11_chr0864 | 428 | 103.4 | 0.296 | 351 |
| smx:SM11_chr1988 | 424 | 102.4 | 0.278 | 316 |
| smx:SM11_pD1181 | 400 | 97.0 | 0.307 | 313 |
| smx:SM11_pD1433 | 377 | 91.7 | 0.277 | 375 |
| smx:SM11_chr2178 | 365 | 89.0 | 0.274 | 369 |
| smx:SM11_pC1530 | 357 | 87.2 | 0.294 | 296 |
| smx:SM11_pD0453 | 355 | 86.7 | 0.271 | 291 |
| smx:SM11_chr1392 | 333 | 81.7 | 0.251 | 335 |
| smx:SM11_pD1200 | 331 | 81.2 | 0.265 | 339 |
| smx:SM11_pD0800 | 324 | 79.7 | 0.252 | 349 |
| smx:SM11_pD1514 | 321 | 79.0 | 0.264 | 397 |
| smx:SM11_pC0437 | 318 | 78.3 | 0.248 | 302 |
| smx:SM11_chr2680 | 311 | 76.7 | 0.282 | 319 |
| smx:SM11_chr2602 | 310 | 76.5 | 0.273 | 333 |
| smx:SM11_pC0438 | 300 | 74.2 | 0.253 | 356 |
| smx:SM11_pC1569 | 294 | 72.8 | 0.256 | 355 |
| smx:SM11_pD1365 | 268 | 66.9 | 0.290 | 217 |
| smx:SM11_pC1734 | 268 | 66.9 | 0.277 | 314 |
| smx:SM11_pD1225 | 259 | 64.8 | 0.263 | 354 |
| smx:SM11_chr3487 | 244 | 61.4 | 0.236 | 347 |
| smx:SM11_chr1737 | 234 | 59.1 | 0.249 | 341 |
| smx:SM11_chr0612 | 232 | 58.7 | 0.251 | 303 |
| smx:SM11_pC0007 | 229 | 58.0 | 0.246 | 281 |
| smx:SM11_chr0539 | 219 | 55.7 | 0.307 | 179 |
| smx:SM11_chr0203 | 183 | 47.5 | 0.252 | 250 |
| smx:SM11_pC0869 | 154 | 40.9 | 0.330 | 115 |