| Entry | SW_score | bits | identity | overlap |
| smx:SM11_chr0855 | 524 | 125.2 | 0.291 | 412 |
| smx:SM11_chr3414 | 517 | 123.6 | 0.271 | 406 |
| smx:SM11_chr0181 | 404 | 97.9 | 0.291 | 357 |
| smx:SM11_chr2250 | 388 | 94.2 | 0.265 | 404 |
| smx:SM11_chr0192 | 340 | 83.3 | 0.258 | 391 |
| smx:SM11_chr1676 | 338 | 82.8 | 0.236 | 402 |
| smx:SM11_chr1357 | 303 | 74.9 | 0.292 | 233 |
| smx:SM11_chr2657 | 275 | 68.5 | 0.264 | 379 |
| smx:SM11_pC1575 | 209 | 53.4 | 0.294 | 228 |
| smx:SM11_chr2824 | 208 | 53.2 | 0.242 | 260 |
| smx:SM11_chr3396 | 183 | 47.5 | 0.279 | 312 |
| smx:SM11_chr1623 | 170 | 44.5 | 0.265 | 196 |
| smx:SM11_chr1386 | 156 | 41.4 | 0.253 | 297 |
| smx:SM11_pD0840 | 104 | 29.5 | 0.366 | 82 |