| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_0645 | 761 | 179.3 | 0.576 | 205 |
| pol:Bpro_4773 | 306 | 75.5 | 0.341 | 208 |
| pol:Bpro_0387 | 259 | 64.8 | 0.305 | 197 |
| pol:Bpro_5179 | 237 | 59.8 | 0.280 | 200 |
| pol:Bpro_2015 | 236 | 59.6 | 0.314 | 185 |
| pol:Bpro_0991 | 229 | 58.0 | 0.313 | 201 |
| pol:Bpro_1375 | 226 | 57.3 | 0.284 | 208 |
| pol:Bpro_5178 | 219 | 55.7 | 0.242 | 190 |
| pol:Bpro_0079 | 215 | 54.8 | 0.290 | 186 |
| pol:Bpro_2962 | 206 | 52.8 | 0.285 | 172 |
| pol:Bpro_5174 | 191 | 49.3 | 0.295 | 183 |
| pol:Bpro_2136 | 191 | 49.3 | 0.275 | 200 |
| pol:Bpro_4241 | 178 | 46.4 | 0.281 | 135 |
| pol:Bpro_4176 | 159 | 42.0 | 0.271 | 192 |
| pol:Bpro_0243 | 152 | 40.4 | 0.299 | 97 |
| pol:Bpro_3912 | 146 | 39.1 | 0.325 | 117 |