| Entry | SW_score | bits | identity | overlap |
| syp:SYNPCC7002_A2061 | 1920 | 443.5 | 0.711 | 409 |
| syp:SYNPCC7002_A0708 | 323 | 79.4 | 0.271 | 328 |
| syp:SYNPCC7002_A2421 | 269 | 67.1 | 0.268 | 299 |
| syp:SYNPCC7002_A0755 | 239 | 60.3 | 0.340 | 238 |
| syp:SYNPCC7002_A1701 | 205 | 52.5 | 0.279 | 215 |
| syp:SYNPCC7002_A2062 | 189 | 48.9 | 0.282 | 170 |
| syp:SYNPCC7002_A0341 | 186 | 48.2 | 0.285 | 130 |