| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_1435 | 176 | 45.9 | 0.298 | 151 |
| pol:Bpro_3613 | 150 | 40.0 | 0.277 | 141 |
| pol:Bpro_4325 | 150 | 40.0 | 0.265 | 151 |
| pol:Bpro_2329 | 148 | 39.5 | 0.314 | 102 |
| pol:Bpro_2152 | 134 | 36.3 | 0.310 | 84 |
| pol:Bpro_3660 | 130 | 35.4 | 0.302 | 139 |
| pol:Bpro_1329 | 123 | 33.8 | 0.416 | 77 |
| pol:Bpro_4651 | 119 | 32.9 | 0.354 | 82 |
| pol:Bpro_4510 | 118 | 32.7 | 0.511 | 47 |
| pol:Bpro_1140 | 117 | 32.5 | 0.407 | 54 |
| pol:Bpro_2871 | 112 | 31.3 | 0.367 | 60 |
| pol:Bpro_2671 | 110 | 30.9 | 0.308 | 91 |
| pol:Bpro_1605 | 108 | 30.4 | 0.304 | 102 |
| pol:Bpro_0647 | 107 | 30.2 | 0.434 | 53 |
| pol:Bpro_1278 | 105 | 29.7 | 0.349 | 83 |
| pol:Bpro_1796 | 101 | 28.8 | 0.471 | 34 |