| Entry | SW_score | bits | identity | overlap |
| syp:SYNPCC7002_A1665 | 274 | 68.3 | 0.298 | 258 |
| syp:SYNPCC7002_A0459 | 247 | 62.1 | 0.263 | 289 |
| syp:SYNPCC7002_A0870 | 244 | 61.4 | 0.281 | 235 |
| syp:SYNPCC7002_A2735 | 244 | 61.4 | 0.259 | 274 |
| syp:SYNPCC7002_A1682 | 214 | 54.6 | 0.258 | 217 |
| syp:SYNPCC7002_A1727 | 208 | 53.2 | 0.245 | 265 |
| syp:SYNPCC7002_A0446 | 205 | 52.5 | 0.269 | 197 |
| syp:SYNPCC7002_A0807 | 185 | 48.0 | 0.295 | 139 |