| Entry | SW_score | bits | identity | overlap |
| smx:SM11_chr3194 | 406 | 98.3 | 0.276 | 493 |
| smx:SM11_chr1027 | 401 | 97.2 | 0.266 | 493 |
| smx:SM11_pD1129 | 255 | 63.9 | 0.236 | 529 |
| smx:SM11_chr0984 | 242 | 61.0 | 0.277 | 224 |
| smx:SM11_pD0626 | 231 | 58.5 | 0.270 | 244 |
| smx:SM11_chr3103 | 222 | 56.4 | 0.268 | 228 |
| smx:SM11_pD1493 | 198 | 50.9 | 0.261 | 299 |
| smx:SM11_chr0983 | 195 | 50.2 | 0.254 | 240 |
| smx:SM11_pC0842 | 190 | 49.1 | 0.256 | 250 |
| smx:SM11_pC0605 | 187 | 48.4 | 0.253 | 241 |
| smx:SM11_chr2675 | 184 | 47.7 | 0.272 | 243 |
| smx:SM11_pC0615 | 179 | 46.6 | 0.262 | 275 |
| smx:SM11_chr3132 | 128 | 35.0 | 0.306 | 108 |
| smx:SM11_chr2757 | 108 | 30.4 | 0.306 | 62 |
| smx:SM11_chr3421 | 107 | 30.2 | 0.372 | 78 |
| smx:SM11_chr2660 | 107 | 30.2 | 0.333 | 51 |
| smx:SM11_pC0540 | 102 | 29.0 | 0.391 | 46 |
| smx:SM11_chr0082 | 100 | 28.6 | 0.382 | 55 |