SSDB Paralog Search Result

KEGG ID :aaa:Acav_2693 (936 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01445 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 28 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
aaa:Acav_0445 ATP dependent DNA ligase                  K10747     566      261 (    -)      65    0.302    371      -> 
aaa:Acav_0705 hypothetical protein                      K02451     250      133 (    -)      36    0.419    62       -> 
aaa:Acav_4192 pseudouridine synthase Rsu                K06182     347      131 (    -)      36    0.363    102      -> 
aaa:Acav_1233 FimV N-terminal domain protein            K08086     944      123 (    -)      34    0.345    110      -> 
aaa:Acav_1458 pseudouridine synthase Rsu                K06178     485      120 (    -)      33    0.303    119      -> 
aaa:Acav_1080 transcriptional regulator, GntR family               286      117 (    -)      33    0.436    55       -> 
aaa:Acav_1360 methyl-accepting chemotaxis sensory trans K03406     615      115 (    -)      32    0.304    92       -> 
aaa:Acav_2811 Tetratricopeptide TPR_1 repeat-containing            374      114 (    -)      32    0.426    61       -> 
aaa:Acav_3970 serine/threonine protein kinase                      648      114 (    -)      32    0.369    84       -> 
aaa:Acav_1252 PhoH family protein                       K07175     609      113 (    -)      32    0.338    68       -> 
aaa:Acav_0636 ribonucleoside-diphosphate reductase, ade K00525    1226      106 (    -)      30    0.320    128      -> 
aaa:Acav_2559 DNA polymerase III, subunits gamma and ta K02343     673      106 (    -)      30    0.301    183      -> 
aaa:Acav_2759 glutaredoxin                                         219      104 (    -)      30    0.319    116      -> 
aaa:Acav_4023 Fimbrial assembly family protein          K02461     424      104 (    -)      30    0.315    89       -> 
aaa:Acav_0033 diguanylate cyclase/phosphodiesterase wit           1499      103 (    -)      29    0.333    69       -> 
aaa:Acav_0643 Protein of unknown function DUF3108                  415      103 (    -)      29    0.338    71       -> 
aaa:Acav_1749 hypothetical protein                                 177      103 (    -)      29    0.371    89       -> 
aaa:Acav_1800 Sporulation domain-containing protein     K03749     301      103 (    -)      29    0.364    66       -> 
aaa:Acav_0282 methyl-accepting chemotaxis sensory trans K03406     590      101 (    -)      29    0.400    50       -> 
aaa:Acav_1420 hypothetical protein                                 181      101 (    -)      29    0.309    123      -> 
aaa:Acav_2220 putative avirulence protein AvrRxo1                  414      101 (    -)      29    0.312    96       -> 
aaa:Acav_3039 efflux transporter, RND family, MFP subun K03585     448      101 (    -)      29    0.329    76       -> 
aaa:Acav_3781 signal recognition particle-docking prote K03110     431      101 (    -)      29    0.307    88       -> 
aaa:Acav_4221 Domain of unknown function DUF88                     298      101 (    -)      29    0.339    62       -> 
aaa:Acav_0478 lipopolysaccharide transport periplasmic  K09774     216      100 (    -)      29    0.329    85       -> 
aaa:Acav_1549 Malonyl-CoA decarboxylase                 K01578     501      100 (    -)      29    0.315    89       -> 
aaa:Acav_2013 lytic murein transglycosylase                        471      100 (    -)      29    0.320    100      -> 
aaa:Acav_3791 transcriptional regulator, Crp/Fnr family            282      100 (    -)      29    0.314    121      -> 

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