SSDB Paralog Search Result

KEGG ID :acp:A2cp1_0836 (683 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00833 (anm,ats,bne,boe,bter,daa,ddt,deu,dko,dpl,ebs,ecos,hjo,hyp,ido,lez,mol,pshi,pspg,pyc,rmb,rst,rtn,sgi,spmi,vfl,vhr,vmi : calculation not yet completed)
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Search Result : 136 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
acp:A2cp1_0935 DNA ligase D, 3'-phosphoesterase domain   K01971     789     736     174    0.317    688     
acp:A2cp1_1020 DNA polymerase LigD, polymerase domain p  K01971     313     505     121    0.345    290     
acp:A2cp1_0868 ATP dependent DNA ligase                             341     427     103    0.349    341     
acp:A2cp1_4312 DNA ligase I, ATP-dependent Dnl1 (EC:6.5  K10747     513     331      81    0.324    343     
acp:A2cp1_0260 conserved hypothetical protein                      1238     187      48    0.262    543     
acp:A2cp1_1438 ATP-dependent nuclease subunit B-like pr            1029     185      48    0.255    718     
acp:A2cp1_2251 N-acetylmuramoyl-L-alanine amidase (EC:3  K01448     603     182      47    0.269    547     
acp:A2cp1_3940 TPR repeat-containing protein                       3271     174      46    0.268    712     
acp:A2cp1_0514 transglutaminase domain protein                     1431     170      45    0.257    713     
acp:A2cp1_0253 Fe-S oxidoreductase                                  439     168      44    0.311    322     
acp:A2cp1_1203 conserved hypothetical protein            K09942     466     168      44    0.308    247     
acp:A2cp1_2264 PBS lyase HEAT domain protein repeat-con             628     168      44    0.276    533     
acp:A2cp1_0839 ATP-dependent helicase HrpB               K03579     860     159      42    0.266    759     
acp:A2cp1_4175 General secretory system II protein E do             506     159      42    0.410    117     
acp:A2cp1_0826 heat shock protein DnaJ domain protein               618     158      42    0.283    460     
acp:A2cp1_2583 CheA signal transduction histidine kinas  K03407     711     158      42    0.306    324     
acp:A2cp1_4042 Beta-ketoacyl synthase                              2036     157      42    0.262    671     
acp:A2cp1_0911 protein of unknown function DUF181        K09136     379     156      41    0.264    424     
acp:A2cp1_2210 ATP-dependent DNA helicase RecG           K03655     904     155      41    0.260    362     
acp:A2cp1_2390 transcriptional regulator, Fis family                613     153      41    0.287    394     
acp:A2cp1_2983 serine/threonine protein kinase           K12132     982     153      41    0.271    619     
acp:A2cp1_2987 ABC transporter related                              496     152      40    0.281    434     
acp:A2cp1_2765 H+transporting two-sector ATPase C (AC39  K02119     337     151      40    0.284    306     
acp:A2cp1_3455 Tetratricopeptide TPR_2 repeat protein              4104     151      40    0.282    713     
acp:A2cp1_1446 conserved hypothetical protein                       563     148      40    0.300    437     
acp:A2cp1_3642 protein of unknown function DUF748                   955     147      39    0.342    152     
acp:A2cp1_2770 MCP methyltransferase, CheR-type (EC:2.1  K00575     490     141      38    0.356    163     
acp:A2cp1_4471 CheA signal transduction histidine kinas  K03407     684     141      38    0.309    223     
acp:A2cp1_1965 histidine kinase                                     662     140      38    0.429    91      
acp:A2cp1_2229 serine/threonine protein kinase with TPR  K12132     596     135      37    0.300    223     
acp:A2cp1_4230 heat shock protein DnaJ domain protein               267     135      37    0.327    147     
acp:A2cp1_1202 serine/threonine protein kinase           K12132     695     132      36    0.311    241     
acp:A2cp1_4184 conserved hypothetical protein                       366     132      36    0.305    233     
acp:A2cp1_0910 TfuA domain protein core                             403     128      35    0.345    174     
acp:A2cp1_4421 conserved hypothetical protein                       717     128      35    0.305    220     
acp:A2cp1_1926 alpha-2-macroglobulin domain protein      K06894    1971     127      35    0.302    222     
acp:A2cp1_1573 Tetratricopeptide domain protein                     278     126      35    0.315    178     
acp:A2cp1_0765 conserved hypothetical protein                       217     125      34    0.344    93      
acp:A2cp1_1252 conserved hypothetical protein                       402     125      34    0.314    191     
acp:A2cp1_1927 glycosyl transferase family 51            K05367     782     125      34    0.315    165     
acp:A2cp1_2461 tRNA(Ile)-lysidine synthetase             K04075     450     125      34    0.319    182     
acp:A2cp1_3567 Methyltransferase type 11                            242     124      34    0.339    186     
acp:A2cp1_0319 histidine kinase                                     707     122      34    0.390    59      
acp:A2cp1_0763 response regulator receiver protein                  959     122      34    0.333    126     
acp:A2cp1_1568 response regulator receiver protein                  476     121      33    0.326    172     
acp:A2cp1_2263 pseudouridine synthase                    K06178     324     121      33    0.324    142     
acp:A2cp1_2389 HEAT domain containing protein                       202     121      33    0.335    194     
acp:A2cp1_2430 Sporulation domain protein                           242     121      33    0.402    82      
acp:A2cp1_1551 ATPase AAA-2 domain protein               K03696     813     120      33    0.391    87      
acp:A2cp1_0834 2-oxoglutarate dehydrogenase, E2 subunit  K00658     437     119      33    0.392    74      
acp:A2cp1_1181 glutamate-ammonia ligase adenylyltransfe  K00982    1014     119      33    0.345    171     
acp:A2cp1_3915 cytochrome C family protein                          358     119      33    0.330    112     
acp:A2cp1_3893 conserved hypothetical protein                       331     118      33    0.317    142     
acp:A2cp1_0803 Peptidase M23                                        292     117      33    0.311    167     
acp:A2cp1_2985 conserved hypothetical protein                       175     117      33    0.356    90      
acp:A2cp1_0009 conserved hypothetical protein                       347     116      32    0.417    60      
acp:A2cp1_0422 conserved hypothetical protein                       160     116      32    0.303    109     
acp:A2cp1_0616 conserved hypothetical protein                       295     116      32    0.333    81      
acp:A2cp1_2555 conserved hypothetical protein                       439     116      32    0.305    266     
acp:A2cp1_1288 mucin-associated surface protein (MASP),             238     115      32    0.320    100     
acp:A2cp1_3473 putative vgr-related protein                         753     115      32    0.321    190     
acp:A2cp1_3929 conserved hypothetical protein                       538     115      32    0.303    300     
acp:A2cp1_0489 conserved hypothetical protein                       199     114      32    0.304    191     
acp:A2cp1_1315 Hedgehog/intein hint domain protein                 1115     114      32    0.306    108     
acp:A2cp1_1484 serine/threonine protein kinase                      548     114      32    0.302    159     
acp:A2cp1_0959 multiheme cytochrome                                 447     113      32    0.333    102     
acp:A2cp1_2463 conserved hypothetical protein                       426     113      32    0.312    109     
acp:A2cp1_3221 conserved hypothetical protein                       427     113      32    0.321    109     
acp:A2cp1_3829 response regulator receiver protein                  713     113      32    0.306    147     
acp:A2cp1_0597 Diaminopimelate epimerase (EC:5.1.1.7)    K01778     266     112      31    0.302    268     
acp:A2cp1_2563 conserved hypothetical protein                       189     112      31    0.308    143     
acp:A2cp1_3327 ribosome small subunit-dependent GTPase   K06949     350     112      31    0.318    173     
acp:A2cp1_0781 CRISPR-associated protein, Cse4 family    K19124     413     111      31    0.301    143     
acp:A2cp1_1988 translation initiation factor IF-3        K02520     230     111      31    0.449    49      
acp:A2cp1_2160 GrpE protein                              K03687     212     111      31    0.326    187     
acp:A2cp1_0058 butyrate kinase                           K00929     376     110      31    0.377    106     
acp:A2cp1_0296 conserved hypothetical protein                       349     110      31    0.359    92      
acp:A2cp1_1355 protein of unknown function DUF52         K06990     265     110      31    0.302    149     
acp:A2cp1_1720 Cyclopropane-fatty-acyl-phospholipid syn  K00574     440     110      31    0.301    246     
acp:A2cp1_2952 conserved hypothetical protein                       402     110      31    0.301    166     
acp:A2cp1_2979 type IV pilus assembly PilZ                          326     110      31    0.333    180     
acp:A2cp1_1601 conserved hypothetical protein                       384     109      31    0.393    89      
acp:A2cp1_2158 ATP-dependent metalloprotease FtsH (EC:3  K03798     706     109      31    0.329    149     
acp:A2cp1_0966 putative dihydrolipoamide S-succinyltran             191     108      30    0.404    89      
acp:A2cp1_1829 conserved hypothetical protein                       270     108      30    0.302    192     
acp:A2cp1_1883 protein of unknown function DUF541        K09807     242     108      30    0.395    76      
acp:A2cp1_1915 phosphomethylpyrimidine kinase            K00941     261     108      30    0.330    179     
acp:A2cp1_2596 GTP-binding signal recognition particle   K02404     380     108      30    0.362    80      
acp:A2cp1_2850 cytochrome c family protein                          309     108      30    0.412    68      
acp:A2cp1_2883 gid protein                               K04094     453     108      30    0.336    122     
acp:A2cp1_3587 conserved hypothetical protein                       181     108      30    0.364    99      
acp:A2cp1_1454 penicillin-binding protein 2 (EC:2.4.1.1  K05515     684     107      30    0.324    136     
acp:A2cp1_1921 protein of unknown function DUF214        K02004     842     107      30    0.327    165     
acp:A2cp1_3898 conserved hypothetical protein                       346     107      30    0.320    175     
acp:A2cp1_4112 MOFRL domain protein                      K00050     430     107      30    0.307    166     
acp:A2cp1_4114 NusB/RsmB/TIM44                           K03500     455     107      30    0.327    205     
acp:A2cp1_2244 putative transmembrane protein                       269     106      30    0.316    187     
acp:A2cp1_2569 OmpA/MotB domain protein                  K02557     259     106      30    0.331    142     
acp:A2cp1_2590 flagellar biosynthesis protein FliO                  227     106      30    0.336    143     
acp:A2cp1_3096 alpha amylase catalytic region                       479     106      30    0.322    205     
acp:A2cp1_4103 2'-5' RNA ligase                          K01975     194     106      30    0.301    163     
acp:A2cp1_4155 conserved hypothetical protein                       179     106      30    0.343    105     
acp:A2cp1_2477 Collagen triple helix repeat protein                 207     105      30    0.341    82      
acp:A2cp1_3466 TPR repeat-containing protein                       1191     105      30    0.309    188     
acp:A2cp1_3993 RNA polymerase, sigma-24 subunit, ECF su  K03088     223     105      30    0.373    75      
acp:A2cp1_0906 transcriptional regulator, LuxR family               208     104      30    0.302    199     
acp:A2cp1_1481 Heparinase II/III family protein                     702     104      30    0.316    152     
acp:A2cp1_1758 transcriptional regulator, LuxR family               374     104      30    0.326    135     
acp:A2cp1_2055 Uroporphyrin-III C/tetrapyrrole (Corrin/  K07056     292     104      30    0.359    103     
acp:A2cp1_3370 conserved hypothetical protein                       260     104      30    0.321    109     
acp:A2cp1_3463 FHA domain containing protein                        680     104      30    0.394    66      
acp:A2cp1_4121 conserved hypothetical protein                       305     104      30    0.328    177     
acp:A2cp1_2771 CheW protein                              K03408     212     103      29    0.312    202     
acp:A2cp1_2876 heat shock protein DnaJ domain protein               319     103      29    0.310    268     
acp:A2cp1_3785 putative GAF sensor protein                          302     103      29    0.319    138     
acp:A2cp1_3882 FHA domain containing protein                        258     103      29    0.360    111     
acp:A2cp1_4065 transcriptional regulator protein-like p  K13572     511     103      29    0.356    135     
acp:A2cp1_4245 glycosyl transferase group 1                         414     103      29    0.324    170     
acp:A2cp1_0683 acetyl-CoA carboxylase, biotin carboxyl   K02160     179     102      29    0.333    99      
acp:A2cp1_0831 conserved hypothetical protein                       376     102      29    0.357    126     
acp:A2cp1_1170 ribosomal RNA methyltransferase RrmJ/Fts  K02427     298     102      29    0.371    89      
acp:A2cp1_2892 conserved hypothetical protein                       225     102      29    0.341    129     
acp:A2cp1_0806 GAF sensor signal transduction histidine             587     101      29    0.303    337     
acp:A2cp1_1789 conserved hypothetical protein                       410     101      29    0.373    67      
acp:A2cp1_1864 conserved hypothetical protein                       182     101      29    0.378    82      
acp:A2cp1_2011 monofunctional biosynthetic peptidoglyca  K03814     307     101      29    0.328    131     
acp:A2cp1_2900 type IV pilus assembly PilZ                          296     101      29    0.412    51      
acp:A2cp1_3019 conserved hypothetical protein                       919     101      29    0.303    99      
acp:A2cp1_3304 outer membrane efflux protein                        440     101      29    0.306    144     
acp:A2cp1_4398 phospholipase D/Transphosphatidylase      K06131     464     101      29    0.322    87      
acp:A2cp1_4488 PpiC-type peptidyl-prolyl cis-trans isom             354     101      29    0.750    20      
acp:A2cp1_0138 ribosomal 5S rRNA E-loop binding protein  K02897     240     100      29    0.423    52      
acp:A2cp1_1507 peptidase S58 DmpA                        K01266     489     100      29    0.354    65      
acp:A2cp1_1724 glycosyl hydrolase, BNR repeat protein               367     100      29    0.311    135     
acp:A2cp1_2733 putative PAS/PAC sensor protein                      437     100      29    0.304    158     
acp:A2cp1_3040 conserved hypothetical protein                       351     100      29    0.319    204     

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