SSDB Paralog Search Result

KEGG ID :act:ACLA_080840 (879 a.a.)
Definition:DNA ligase Cdc9, putative; K10747 DNA ligase 1
Update status:T01148 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 18 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
act:ACLA_039060 DNA ligase I, putative                   K10747     834    1264     294    0.331    780     
act:ACLA_015070 DNA ligase, putative                     K10777    1029     471     113    0.273    425     
act:ACLA_002720 ATP-dependent DNA ligase domain protein            1071     251      63    0.231    438     
act:ACLA_045660 rRNA processing protein gar2             K14838     489     197      51    0.305    220     
act:ACLA_075620 hypothetical protein                     K03504     433     195      50    0.281    178     
act:ACLA_030400 SRP40, C-terminal domain protein                    442     176      46    0.273    183     
act:ACLA_035670 ribonucleoprotein, chloroplast           K11294     514     170      45    0.264    208     
act:ACLA_025500 hypothetical protein                               2312     154      41    0.262    256     
act:ACLA_052560 hypothetical protein                               1297     153      41    0.279    197     
act:ACLA_049540 C6 finger domain protein, putative                  754     125      34    0.366    82      
act:ACLA_045830 RING finger domain protein (Znf1), puta             382     120      33    0.300    80      
act:ACLA_025970 hypothetical protein                     K11370     716     118      33    0.312    173     
act:ACLA_009640 RSC complex subunit (Sth1), putative     K11786    1379     115      32    0.313    99      
act:ACLA_084160 RNA lariat debranching enzyme, putative  K18328     746     114      32    0.314    118     
act:ACLA_027490 hypothetical protein                               1524     108      30    0.337    98      
act:ACLA_047990 hypothetical protein                                491     106      30    0.303    119     
act:ACLA_037650 hypothetical protein                                492     102      29    0.311    148     
act:ACLA_096790 nascent polypeptide-associated complex   K03626     204     102      29    0.312    109     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]