SSDB Paralog Search Result

KEGG ID :amd:AMED_4197 (299 a.a.)
Definition:ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01269 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 9 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670     1336 (    -)     310    0.681    295      -> 
amd:AMED_4189 ATP-dependent DNA ligase                  K01971     525      563 (    -)     134    0.373    292      -> 
amd:AMED_5203 ATP-dependent DNA ligase                  K01971     287      533 (    -)     127    0.339    274      -> 
amd:AMED_4612 ATP-dependent DNA ligase                             314      472 (    -)     113    0.309    291      -> 
amd:AMED_4149 ATP-dependent DNA ligase                             334      461 (    -)     111    0.326    301      -> 
amd:AMED_2655 ATP-dependent DNA ligase                             338      446 (    -)     108    0.317    290      -> 
amd:AMED_8354 ATP-dependent DNA ligase/DNA primase                 319      416 (    -)     101    0.353    266      -> 
amd:AMED_3752 AraC family transcriptional regulator                301      103 (    -)      29    0.319    91       -> 
amd:AMED_4404 L-arabinose isomerase                     K01804     499      102 (    -)      29    0.330    109      -> 

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