SSDB Paralog Search Result

KEGG ID :amd:AMED_4612 (314 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01269 (babr,banh,bcef,blx,blz,bmee,bmp,bpsh,brp,bsg,bsul,bsut,bsw,bthm,bthr,btv,but,bww,cbz,cdo,cjv,cmg,cmm,cun,cuq,cus,cuz,eclg,fpq,frf,hav,hia,kpb,kpt,kpx,lia,lii,lio,llx,mavd,mde,mfc,mgj,mhom,mie,msb,msh,msn,mus,nmx,npn,nte,pcv,ppnm,ppud,pstt,pxb,sagt,smer,stax,syj,teu,tki,trm,vcq,vcy,vda,vtu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amd:AMED_2655 ATP-dependent DNA ligase                   K01971     338    1053     246    0.494    312     
amd:AMED_4149 ATP-dependent DNA ligase                   K01971     334     934     219    0.476    313     
amd:AMED_4189 ATP-dependent DNA ligase                   K01971     525     601     143    0.370    281     
amd:AMED_3255 ATP-dependent DNA ligase                   K01971     670     518     124    0.334    296     
amd:AMED_5203 ATP-dependent DNA ligase                   K01971     287     484     116    0.319    288     
amd:AMED_4197 ATP-dependent DNA ligase                   K01971     299     472     113    0.309    291     
amd:AMED_8354 ATP-dependent DNA ligase/DNA primase                  319     398      97    0.319    276     
amd:AMED_5214 hypothetical protein                                  505     109      31    0.308    172     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]