SSDB Paralog Search Result

KEGG ID :amd:AMED_5275 (355 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01269 (abp,abv,adl,bamt,bans,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,pco,pes,pfp,psq,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 20 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amd:AMED_4189 ATP-dependent DNA ligase                   K01971     525     429     104    0.425    193     
amd:AMED_3255 ATP-dependent DNA ligase                   K01971     670     276      69    0.324    207     
amd:AMED_4489 ATP-dependent DNA ligase                   K01971     123     260      65    0.371    124     
amd:AMED_5204 ATP-dependent DNA ligase                   K01971     314     234      59    0.272    191     
amd:AMED_2669 ATP-dependent DNA ligase                   K01971     359     225      57    0.307    189     
amd:AMED_8064 ATP-dependent DNA ligase                   K01971     510     200      51    0.284    197     
amd:AMED_4148 ATP-dependent DNA ligase                   K01971     354     179      47    0.269    193     
amd:AMED_4873 X-Pro dipeptidase                                     380     120      33    0.271    210     
amd:AMED_5018 glycosyl transferase family protein                   603     120      33    0.331    136     
amd:AMED_6813 beta-lactamase class B                                269     112      31    0.246    195     
amd:AMED_1891 asparagine synthase                        K01953     613     107      30    0.255    106     
amd:AMED_0127 hypothetical protein                                  126     104      30    0.284    116     
amd:AMED_4428 oxidoreductase                                        390     104      30    0.282    156     
amd:AMED_5034 non-ribosomal peptide synthetase                     6011     104      30    0.268    239     
amd:AMED_3875 acyl-CoA dehydrogenase                                431     103      29    0.245    265     
amd:AMED_5546 epoxide hydrolase                                     373     103      29    0.245    216     
amd:AMED_3975 sugar ABC transporter ATPase               K10441     499     102      29    0.319    141     
amd:AMED_7567 hypothetical protein                                  324     102      29    0.323    124     
amd:AMED_2978 glycosyl hydrolase                                    799     101      29    0.216    148     
amd:AMED_2417 rhodanese-like protein                     K01011     281     100      29    0.279    222     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]