SSDB Paralog Search Result

KEGG ID :amd:AMED_8064 (510 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01269 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 127 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amd:AMED_2669 ATP-dependent DNA ligase                   K01971     359     345      84    0.323    350     
amd:AMED_4148 ATP-dependent DNA ligase                   K01971     354     293      73    0.294    347     
amd:AMED_5204 ATP-dependent DNA ligase                   K01971     314     283      70    0.290    297     
amd:AMED_3255 ATP-dependent DNA ligase                   K01971     670     264      66    0.283    336     
amd:AMED_5275 ATP-dependent DNA ligase                   K01971     355     200      51    0.284    197     
amd:AMED_8118 SARP family transcriptional regulator/ATP            1077     141      38    0.242    384     
amd:AMED_1359 hypothetical protein                                  859     131      36    0.255    533     
amd:AMED_3843 2-methylcitrate dehydratase                           456     131      36    0.223    453     
amd:AMED_4398 sugar ABC transporter ATPase               K02056     506     131      36    0.247    364     
amd:AMED_0580 hypothetical protein                                  581     130      35    0.286    266     
amd:AMED_1243 hypothetical protein                                  479     130      35    0.294    201     
amd:AMED_0617 rifamycin polyketide synthase              K15670    4735     127      35    0.264    440     
amd:AMED_6434 hypothetical protein                                  343     127      35    0.254    209     
amd:AMED_6348 hypothetical protein                                  216     126      35    0.342    120     
amd:AMED_6541 two-component system response regulator               388     123      34    0.250    360     
amd:AMED_4014 SARP family transcriptional regulator                 902     120      33    0.257    268     
amd:AMED_5421 SARP family transcriptional regulator                 617     120      33    0.260    335     
amd:AMED_9311 two-component system histidine kinase                 378     120      33    0.228    206     
amd:AMED_2764 methionyl-tRNA formyltransferase           K00604     308     119      33    0.275    229     
amd:AMED_0970 two-component system histidine kinase                 366     118      33    0.291    275     
amd:AMED_3308 two-component system histidine kinase                 935     118      33    0.255    424     
amd:AMED_4119 ATPase                                     K06860    1131     118      33    0.228    351     
amd:AMED_8040 spermidine/putrescine ABC transporter ATP  K02062     335     118      33    0.291    134     
amd:AMED_0620 rifamycin polyketide synthase              K15672    1728     117      33    0.253    340     
amd:AMED_5046 ABC transporter ATP-binding protein                   545     116      32    0.274    248     
amd:AMED_2313 XRE family transcriptional regulator                  278     115      32    0.273    231     
amd:AMED_2319 integral membrane protein                             488     114      32    0.303    152     
amd:AMED_9086 phosphoribosylamine--glycine ligase        K01945     424     114      32    0.260    361     
amd:AMED_9359 chromosome partitioning protein ParB       K03497     333     114      32    0.238    298     
amd:AMED_2013 nucleotide-diphosphate-sugar epimerase/Nm             271     113      32    0.242    285     
amd:AMED_1487 LuxR family transcriptional regulator                 791     112      31    0.277    375     
amd:AMED_2994 hypothetical protein                                  407     112      31    0.286    241     
amd:AMED_3215 transport ATPase                           K12955    1392     112      31    0.258    488     
amd:AMED_7011 GntR family transcriptional regulator      K00375     465     112      31    0.248    347     
amd:AMED_8525 hypothetical protein                                  745     112      31    0.254    370     
amd:AMED_0464 xylose isomerase                                      267     111      31    0.291    175     
amd:AMED_1277 two-component system histidine kinase                 524     111      31    0.301    183     
amd:AMED_1715 exonuclease SbcC                           K03546     961     111      31    0.258    341     
amd:AMED_2316 hypothetical protein                                  501     111      31    0.247    283     
amd:AMED_4034 non-ribosomal peptide synthetase                     3338     111      31    0.236    534     
amd:AMED_7427 serine/threonine phosphatase                          389     111      31    0.240    225     
amd:AMED_7060 arabinosyltransferase                      K11387    1017     110      31    0.258    225     
amd:AMED_8050 exonuclease SbcC                           K03546     983     110      31    0.302    215     
amd:AMED_5847 integral membrane protein                             371     109      31    0.276    181     
amd:AMED_6344 class V aminotransferase                              337     109      31    0.254    350     
amd:AMED_3551 two-component system histidine kinase                 378     108      30    0.249    285     
amd:AMED_4420 SARP family transcriptional regulator                 885     108      30    0.256    285     
amd:AMED_7469 two-component system histidine kinase                 731     108      30    0.253    450     
amd:AMED_8993 ADP-ribosylglycohydrolase                  K05521     331     108      30    0.261    188     
amd:AMED_2874 diguanylate cyclase/phosphodiesterase                 605     107      30    0.311    122     
amd:AMED_3416 major facilitator superfamily transporter  K08167     496     107      30    0.292    192     
amd:AMED_3546 NADPH:quinone reductase and related Zn-de             329     107      30    0.256    238     
amd:AMED_3894 ROK family transcriptional regulator                  372     107      30    0.278    252     
amd:AMED_5471 two-component system sensor kinase                    583     107      30    0.264    182     
amd:AMED_5788 hypothetical protein                                  320     107      30    0.257    284     
amd:AMED_6534 iron ABC transporter permease              K02015     357     107      30    0.288    163     
amd:AMED_7346 hypothetical protein                                 1084     107      30    0.265    268     
amd:AMED_8932 two-component system histidine kinase                 384     107      30    0.234    419     
amd:AMED_3582 two-component system histidine kinase                 434     106      30    0.265    340     
amd:AMED_3637 hypothetical protein                                  320     106      30    0.292    192     
amd:AMED_5971 NAD-dependent aldehyde dehydrogenase       K14519     484     106      30    0.250    344     
amd:AMED_6457 SARP family transcriptional regulator                 928     106      30    0.262    225     
amd:AMED_6897 heavy metal translocating P-type ATPase               698     106      30    0.261    303     
amd:AMED_7269 2-dehydropantoate 2-reductase              K00077     327     106      30    0.278    115     
amd:AMED_7446 DNA polymerase III subunit alpha           K14162    1109     106      30    0.269    417     
amd:AMED_7451 DNA polymerase                                        458     106      30    0.248    306     
amd:AMED_8011 SARP family transcriptional regulator                 975     106      30    0.259    468     
amd:AMED_1903 chromosome segregation ATPase              K03529    1200     105      30    0.271    258     
amd:AMED_4601 DNA helicase-like protein                            1137     105      30    0.248    307     
amd:AMED_4661 muramoyltetrapeptide carboxypeptidase      K01297     299     105      30    0.338    133     
amd:AMED_5170 GTPase                                                490     105      30    0.294    231     
amd:AMED_5226 diaminopimelate decarboxylase              K01586     442     105      30    0.294    272     
amd:AMED_5382 hypothetical protein                                  453     105      30    0.248    387     
amd:AMED_5727 two-component system histidine kinase                 454     105      30    0.322    118     
amd:AMED_6099 ABC transporter permease                   K02069     247     105      30    0.277    202     
amd:AMED_6776 xylose isomerase                           K01805     382     105      30    0.262    229     
amd:AMED_7291 chromosome partitioning protein ParB       K03497     370     105      30    0.269    360     
amd:AMED_0750 UDP-N-acetylglucosamine 2-epimerase        K01791     383     104      30    0.274    328     
amd:AMED_0912 serine/threonine protein kinase                       580     104      30    0.228    403     
amd:AMED_1680 glucose dehydrogenase                                 402     104      30    0.256    195     
amd:AMED_2859 hypothetical protein                                  962     104      30    0.298    161     
amd:AMED_3090 sugar ABC transporter ATPase               K02056     499     104      30    0.250    348     
amd:AMED_3460 beta-lactamase class C                                461     104      30    0.249    249     
amd:AMED_3815 3-oxoacyl-ACP reductase                               256     104      30    0.303    122     
amd:AMED_4145 hypothetical protein                                  386     104      30    0.273    161     
amd:AMED_4526 two-component system sensor kinase                   1516     104      30    0.215    368     
amd:AMED_4860 ABC transporter ATP-binding protein                   230     104      30    0.242    223     
amd:AMED_7543 major facilitator superfamily transporter             466     104      30    0.291    175     
amd:AMED_8154 LuxR family transcriptional regulator                 935     104      30    0.243    485     
amd:AMED_0155 hypothetical protein                                  246     103      29    0.293    157     
amd:AMED_1186 hypothetical protein                                  984     103      29    0.239    238     
amd:AMED_1390 ABC transporter permease                   K02004     713     103      29    0.296    294     
amd:AMED_1527 SARP family transcriptional regulator                 978     103      29    0.245    444     
amd:AMED_2888 acetyl/propionyl-CoA carboxylase, biotin   K01965     649     103      29    0.261    165     
amd:AMED_3050 anti-sigma regulatory factor, serine/thre             351     103      29    0.262    279     
amd:AMED_3490 LuxR family transcriptional regulator                 943     103      29    0.322    146     
amd:AMED_3929 NADPH:quinone reductase and related Zn-de  K00344     330     103      29    0.258    217     
amd:AMED_4293 FAD-dependent oxidoreductase                          500     103      29    0.300    210     
amd:AMED_4800 non-ribosomal peptide synthetase                     2390     103      29    0.263    525     
amd:AMED_5996 amino acid adenylation domain-containing             1298     103      29    0.248    415     
amd:AMED_7625 hypothetical protein                                  869     103      29    0.243    536     
amd:AMED_0618 rifamycin polyketide synthase              K15671    5060     102      29    0.220    419     
amd:AMED_0647 acyltransferase                            K16023     403     102      29    0.255    137     
amd:AMED_2449 arsenite-transporting ATPase               K01551     377     102      29    0.254    402     
amd:AMED_4314 SARP family transcriptional regulator/ATP            1001     102      29    0.285    221     
amd:AMED_4801 lantibiotic dehydratase                               743     102      29    0.262    389     
amd:AMED_4845 ATPase                                                661     102      29    0.280    193     
amd:AMED_4926 major facilitator superfamily transporter             414     102      29    0.292    192     
amd:AMED_5034 non-ribosomal peptide synthetase                     6011     102      29    0.260    373     
amd:AMED_5817 hypothetical protein                                  618     102      29    0.250    200     
amd:AMED_5839 DeoR family transcriptional regulator                 250     102      29    0.262    275     
amd:AMED_6268 hypothetical protein                                  424     102      29    0.270    178     
amd:AMED_7081 hypothetical protein                       K06915     508     102      29    0.235    426     
amd:AMED_8463 ABC transporter permease                   K02004     401     102      29    0.251    379     
amd:AMED_0800 hypothetical protein                                  644     101      29    0.391    92      
amd:AMED_3323 LuxR family transcriptional regulator                 764     101      29    0.264    144     
amd:AMED_4159 LysR family transcriptional regulator                 299     101      29    0.375    88      
amd:AMED_4189 ATP-dependent DNA ligase                   K01971     525     101      29    0.259    301     
amd:AMED_7143 ferredoxin--NAD+ reductase                            396     101      29    0.325    166     
amd:AMED_7260 hypothetical protein                                  682     101      29    0.228    267     
amd:AMED_9316 phosphotransferase system EI component     K08483     549     101      29    0.287    254     
amd:AMED_1742 D-alanine--D-alanine ligase                K01921     364     100      29    0.273    205     
amd:AMED_2092 NAD(P) transhydrogenase subunit beta       K00325     462     100      29    0.227    185     
amd:AMED_3476 XRE family transcriptional regulator                  284     100      29    0.263    278     
amd:AMED_4084 rieske (2Fe-2S) domain-containing protein             357     100      29    0.248    258     
amd:AMED_5870 coenzyme F420-dependent N5,N10-methenylte             271     100      29    0.243    152     
amd:AMED_7551 sarcosine oxidase subunit alpha            K00302     845     100      29    0.252    218     

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