SSDB Paralog Search Result

KEGG ID :amm:AMES_4139 (525 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T02190 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amm:AMES_3220 ATP-dependent DNA ligase                   K01971     670     606     144    0.360    358     
amm:AMES_2627 ATP-dependent DNA ligase                   K01971     338     603     143    0.350    297     
amm:AMES_4557 ATP-dependent DNA ligase                   K01971     314     601     143    0.370    281     
amm:AMES_4101 ATP-dependent DNA ligase                   K01971     334     600     143    0.367    283     
amm:AMES_5141 ATP-dependent DNA ligase                   K01971     287     590     140    0.391    274     
amm:AMES_4147 ATP-dependent DNA ligase                   K01971     299     563     134    0.373    292     
amm:AMES_8225 ATP-dependent DNA ligase/DNA primase                  319     527     126    0.363    278     
amm:AMES_5213 ATP-dependent DNA ligase                   K01971     355     429     104    0.425    193     
amm:AMES_4435 ATP-dependent DNA ligase                   K01971     123     223      57    0.370    127     
amm:AMES_0071 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) am  K02433     461     100      29    0.314    86      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]