SSDB Paralog Search Result

KEGG ID :amn:RAM_13495 (338 a.a.)
Definition:ATP-dependent DNA ligase
Update status:T01822 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_23480 ATP-dependent DNA ligase                              314    1053     246    0.494    312     
amn:RAM_21135 ATP-dependent DNA ligase                              334    1004     235    0.456    329     
amn:RAM_21335 ATP-dependent DNA ligase                   K01971     525     603     143    0.350    297     
amn:RAM_16560 ATP-dependent DNA ligase                   K01971     670     553     132    0.340    297     
amn:RAM_26505 ATP-dependent DNA ligase                   K01971     287     473     114    0.302    288     
amn:RAM_21375 ATP-dependent DNA ligase                   K01971     306     453     109    0.314    296     
amn:RAM_42900 ATP-dependent DNA ligase/DNA primase                  319     452     109    0.344    302     
amn:RAM_37890 hypothetical protein                                  419     105      30    0.305    95      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]