SSDB Paralog Search Result

KEGG ID :amn:RAM_21475 (395 a.a.)
Definition:elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Update status:T01822 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,koy,kpa,kps,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,pmum,ppq,psq,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 53 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_03450 elongation factor EF-Tu                    K02358     397    1645     381    0.631    396     
amn:RAM_26055 selenocysteine-specific translation elong  K03833     574     469     113    0.346    384     
amn:RAM_14455 bifunctional sulfate adenylyltransferase   K00955     603     420     102    0.301    422     
amn:RAM_34170 sulfate adenylyltransferase subunit 1      K00956     420     379      92    0.313    310     
amn:RAM_41255 GTP-binding protein TypA                   K06207     641     330      81    0.291    344     
amn:RAM_34275 GTP-binding protein LepA                   K03596     616     275      69    0.282    387     
amn:RAM_41815 elongation factor EF-G/tetracycline resis  K18220     591     273      68    0.310    329     
amn:RAM_32500 translation initiation factor IF-2         K02519    1004     258      65    0.320    250     
amn:RAM_22775 elongation factor G                        K02355     651     233      59    0.275    404     
amn:RAM_03445 elongation factor EF-G                     K02355     699     192      50    0.320    178     
amn:RAM_03160 rifamycin polyketide synthase              K15671    5060     142      38    0.293    304     
amn:RAM_27085 elongation factor G                        K02355     702     135      37    0.324    105     
amn:RAM_07550 LuxR family transcriptional regulator                 791     118      33    0.245    400     
amn:RAM_09750 carbon-monoxide dehydrogenase large subun             753     118      33    0.253    419     
amn:RAM_12315 acyl-CoA dehydrogenase                                340     116      32    0.275    178     
amn:RAM_46890 molybdopterin-binding oxidoreductase                  714     113      32    0.251    387     
amn:RAM_09830 ECF subfamily RNA polymerase sigma-70 fac  K03088     284     112      31    0.272    158     
amn:RAM_17945 hypothetical protein                                  704     112      31    0.242    351     
amn:RAM_20560 non-ribosomal peptide synthetase                     3338     112      31    0.264    416     
amn:RAM_25100 MerR family transcriptional regulator                 258     112      31    0.273    194     
amn:RAM_14595 LytR family transcriptional regulator                 400     111      31    0.242    215     
amn:RAM_12265 two-component system histidine kinase                 356     110      31    0.278    158     
amn:RAM_00490 proline/glycine/betaine ABC transporter A  K05847     388     109      31    0.253    297     
amn:RAM_30750 amino acid adenylation domain-containing             1298     109      31    0.269    253     
amn:RAM_40905 glycine/betaine ABC transporter ATPase     K05847     361     109      31    0.259    259     
amn:RAM_02205 YbaK-like protein                                     180     108      30    0.288    153     
amn:RAM_18005 two-component system histidine kinase      K07642     590     108      30    0.344    128     
amn:RAM_04025 two-component system response regulator               226     107      30    0.307    150     
amn:RAM_05880 N-acetylglucosamine kinase                            322     106      30    0.308    104     
amn:RAM_10720 lactate transporter LctP family protein    K03303     536     106      30    0.296    135     
amn:RAM_30880 hypothetical protein                                  403     106      30    0.245    237     
amn:RAM_33160 LuxR family transcriptional regulator      K03556     854     106      30    0.310    168     
amn:RAM_12300 acetoin utilization protein AcuC           K04768     389     105      30    0.264    208     
amn:RAM_20715 non-ribosomal peptide synthase                       2562     105      30    0.254    295     
amn:RAM_28400 amidohydrolase                             K07045     331     105      30    0.254    185     
amn:RAM_39955 F-type H+-transporting ATPase subunit del  K02113     274     105      30    0.280    286     
amn:RAM_07115 threonine dehydrogenase-like protein                  366     104      30    0.313    179     
amn:RAM_25855 two-component system histidine kinase                 494     104      30    0.249    325     
amn:RAM_29455 threonine dehydrogenase-like protein                  344     104      30    0.230    261     
amn:RAM_39290 FMN-dependent monooxygenase                           341     104      30    0.329    85      
amn:RAM_42030 NUDIX hydrolase                            K03574     240     103      29    0.270    163     
amn:RAM_16270 serine/threonine protein kinase                       526     102      29    0.295    156     
amn:RAM_23045 two-component system sensor kinase                   1516     102      29    0.225    209     
amn:RAM_35065 major facilitator superfamily transporter             393     102      29    0.283    205     
amn:RAM_46680 hypothetical protein                                  626     102      29    0.268    157     
amn:RAM_07565 isoniazid inducible gene protein IniA                 601     101      29    0.291    117     
amn:RAM_30755 GTP-binding protein Der                    K03977     486     101      29    0.234    192     
amn:RAM_02830 oxidoreductase                                        725     100      29    0.257    300     
amn:RAM_03155 rifamycin polyketide synthase              K15670    4735     100      29    0.247    295     
amn:RAM_12100 FAD-dependent oxidoreductase                          369     100      29    0.248    214     
amn:RAM_15205 integral membrane protein                             215     100      29    0.317    104     
amn:RAM_20065 formyl transferase-like protein                       563     100      29    0.249    277     
amn:RAM_26355 LuxR family transcriptional regulator fus             861     100      29    0.257    300     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]