SSDB Paralog Search Result

KEGG ID :amn:RAM_26505 (287 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01822 (abp,abv,adl,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gtr,hlr,mlr,mrr,npa,oas,pco,pes,pfp,psq,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 27 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_21135 ATP-dependent DNA ligase                   K01971     334     640     152    0.371    283     
amn:RAM_21335 ATP-dependent DNA ligase                   K01971     525     590     140    0.391    274     
amn:RAM_16560 ATP-dependent DNA ligase                   K01971     670     589     140    0.385    247     
amn:RAM_21375 ATP-dependent DNA ligase                   K01971     306     533     127    0.339    274     
amn:RAM_23480 ATP-dependent DNA ligase                   K01971     314     484     116    0.319    288     
amn:RAM_13495 ATP-dependent DNA ligase                   K01971     338     473     114    0.302    288     
amn:RAM_42900 ATP-dependent DNA ligase/DNA primase                  319     471     113    0.339    277     
amn:RAM_16705 amino acid adenylation domain-containing             1400     121      33    0.292    178     
amn:RAM_41615 hypothetical protein                                  277     118      33    0.282    259     
amn:RAM_13565 peptidase/hydrolase                                   515     115      32    0.283    198     
amn:RAM_19835 hypothetical protein                                  410     111      31    0.284    176     
amn:RAM_23425 DNA helicase-like protein                            1137     111      31    0.317    180     
amn:RAM_25630 non-ribosomal peptide synthetase                     6011     110      31    0.270    318     
amn:RAM_06430 allantoate amidohydrolase                  K06016     398     108      30    0.281    171     
amn:RAM_17125 phenolpthiocerol synthesis type-I polyket  K12443    2197     107      30    0.261    257     
amn:RAM_21935 sulfonate/nitrate/taurine ABC transporter  K02049     257     106      30    0.255    274     
amn:RAM_38160 hypothetical protein                                  335     106      30    0.367    49      
amn:RAM_19345 LamG domain-containing protein receptor              2230     105      30    0.281    139     
amn:RAM_22825 type I polyketide synthase                 K12437    1421     105      30    0.287    223     
amn:RAM_46105 dihydrouridine synthase                               376     105      30    0.270    189     
amn:RAM_46605 glycerophosphoryl diester phosphodiestera  K01126     378     105      30    0.223    238     
amn:RAM_00790 von Willebrand factor type A               K07114     602     104      30    0.252    151     
amn:RAM_04655 methylmalonyl-CoA mutase                   K01847     602     104      30    0.291    258     
amn:RAM_29145 cold shock protein CspA                    K03704     315     104      30    0.257    226     
amn:RAM_39275 hypothetical protein                                  279     102      29    0.249    205     
amn:RAM_20055 epoxide hydrolase                                     387     100      29    0.268    228     
amn:RAM_36890 3-oxosteroid 1-dehydrogenase                          534     100      29    0.343    99      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]