SSDB Paralog Search Result

KEGG ID :amn:RAM_26505 (287 a.a.)
Definition:ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01822 (abal,acz,aeu,bacp,bacw,bchi,bjp,bmaf,bmai,bmaz,bpsp,bsup,bsuv,bvg,camr,care,cbac,cbal,cbv,ccw,cea,cis,cll,clm,cln,clq,clr,cmx,cpel,cvo,dsw,egr,fgu,fpp,gac,hyd,kpv,kvd,lgq,mear,mfq,mmyi,myc,myr,mys,nbv,panp,pbn,pln,pmic,ppul,ppv,pseo,psim,pspu,rga,sage,sagg,sagn,smum,sox,sphk,strs,tcb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_21135 ATP-dependent DNA ligase                              334     640     152    0.371    283     
amn:RAM_21335 ATP-dependent DNA ligase                   K01971     525     590     140    0.391    274     
amn:RAM_16560 ATP-dependent DNA ligase                   K01971     670     589     140    0.385    247     
amn:RAM_21375 ATP-dependent DNA ligase                   K01971     306     533     127    0.339    274     
amn:RAM_23480 ATP-dependent DNA ligase                              314     484     116    0.319    288     
amn:RAM_13495 ATP-dependent DNA ligase                              338     473     114    0.302    288     
amn:RAM_42900 ATP-dependent DNA ligase/DNA primase                  319     471     113    0.339    277     
amn:RAM_13565 peptidase/hydrolase                                   515     115      32    0.300    200     
amn:RAM_23425 DNA helicase-like protein                            1137     111      31    0.317    180     
amn:RAM_38160 hypothetical protein                                  335     106      30    0.367    49      
amn:RAM_36890 3-oxosteroid 1-dehydrogenase                          534     100      29    0.343    99      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]