SSDB Paralog Search Result

KEGG ID :amn:RAM_26870 (355 a.a.)
Definition:ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01822 (aaus,agw,arg,bacl,bgo,bgu,bmeg,bmel,fil,fiy,lis,mavu,mbac,mbw,mby,mef,mek,meq,metm,mls,paly,pck,pfre,pih,pko,pox,pri,reb,rmc,sals,shh,sns,sphi,srd,syb,vba,vcf,vcx,vcz,xbv,ypf,ypo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_21335 ATP-dependent DNA ligase                   K01971     525     429     104    0.425    193     
amn:RAM_16560 ATP-dependent DNA ligase                   K01971     670     276      69    0.324    207     
amn:RAM_22860 ATP-dependent DNA ligase                              123     260      65    0.371    124     
amn:RAM_26510 ATP-dependent DNA ligase                              314     234      59    0.272    191     
amn:RAM_13570 ATP-dependent DNA ligase (EC:6.5.1.1)                 359     225      57    0.307    189     
amn:RAM_41435 ATP-dependent DNA ligase (EC:6.5.1.1)      K10747     510     200      51    0.284    197     
amn:RAM_21130 ATP-dependent DNA ligase (EC:6.5.1.1)                 354     179      47    0.269    193     
amn:RAM_25545 glycosyl transferase family protein                   603     120      33    0.331    136     
amn:RAM_38880 hypothetical protein                                  324     102      29    0.323    124     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]