SSDB Paralog Search Result

KEGG ID :amn:RAM_41435 (510 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T01822 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 124 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
amn:RAM_13570 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     359     345      84    0.323    350     
amn:RAM_21130 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     354     293      73    0.294    347     
amn:RAM_26510 ATP-dependent DNA ligase                   K01971     314     283      70    0.290    297     
amn:RAM_16560 ATP-dependent DNA ligase                   K01971     670     264      66    0.283    336     
amn:RAM_26870 ATP-dependent DNA ligase                   K01971     355     200      51    0.284    197     
amn:RAM_41710 SARP family transcriptional regulator fus            1077     141      38    0.242    384     
amn:RAM_06895 hypothetical protein                                  859     131      36    0.255    533     
amn:RAM_19575 2-methylcitrate dehydratase                           456     131      36    0.223    453     
amn:RAM_22400 sugar ABC transporter ATPase               K02056     500     131      36    0.247    364     
amn:RAM_06310 hypothetical protein                                  457     130      35    0.294    201     
amn:RAM_03155 rifamycin polyketide synthase              K15670    4735     127      35    0.264    440     
amn:RAM_32985 hypothetical protein                                  343     127      35    0.254    209     
amn:RAM_32550 hypothetical protein                                  216     126      35    0.342    120     
amn:RAM_33550 two-component system response regulator               388     123      34    0.250    360     
amn:RAM_20460 SARP family transcriptional regulator                 902     120      33    0.257    268     
amn:RAM_27635 SARP family transcriptional regulator                 617     120      33    0.260    335     
amn:RAM_47745 two-component system histidine kinase                 378     120      33    0.228    206     
amn:RAM_14050 methionyl-tRNA formyltransferase           K00604     308     119      33    0.275    229     
amn:RAM_04940 two-component system histidine kinase                 366     118      33    0.291    275     
amn:RAM_16830 two-component system histidine kinase                1096     118      33    0.255    424     
amn:RAM_20990 ATPase                                     K06860    1137     118      33    0.228    351     
amn:RAM_41305 spermidine/putrescine ABC transporter ATP  K02062     335     118      33    0.291    134     
amn:RAM_03170 rifamycin polyketide synthase              K15672    1728     117      33    0.253    340     
amn:RAM_25690 ABC transporter ATP-binding protein                   545     116      32    0.274    248     
amn:RAM_11775 XRE family transcriptional regulator                  278     115      32    0.273    231     
amn:RAM_46600 phosphoribosylamine--glycine ligase        K01945     424     114      32    0.260    361     
amn:RAM_47990 chromosome partitioning protein ParB       K03497     333     114      32    0.238    298     
amn:RAM_10215 nucleotide-diphosphate-sugar epimerase/Nm             271     113      32    0.242    285     
amn:RAM_07550 LuxR family transcriptional regulator                 791     112      31    0.277    375     
amn:RAM_08715 exonuclease SbcC                           K03546    1151     112      31    0.251    395     
amn:RAM_15225 hypothetical protein                                  407     112      31    0.286    241     
amn:RAM_16345 transport ATPase                           K12955    1392     112      31    0.258    488     
amn:RAM_35965 GntR family transcriptional regulator      K00375     465     112      31    0.248    347     
amn:RAM_43755 hypothetical protein                                  745     112      31    0.254    370     
amn:RAM_02380 xylose isomerase                                      267     111      31    0.291    175     
amn:RAM_06480 two-component system histidine kinase                 524     111      31    0.301    183     
amn:RAM_11790 hypothetical protein                                  501     111      31    0.247    283     
amn:RAM_20560 non-ribosomal peptide synthetase                     3338     111      31    0.236    534     
amn:RAM_38175 serine/threonine phosphatase                          389     111      31    0.240    225     
amn:RAM_36225 arabinosyltransferase                                1017     110      31    0.258    225     
amn:RAM_41365 exonuclease SbcC                           K03546     983     110      31    0.302    215     
amn:RAM_30000 integral membrane protein                             371     109      31    0.276    181     
amn:RAM_32530 class V aminotransferase                              337     109      31    0.254    350     
amn:RAM_18055 two-component system histidine kinase                 378     108      30    0.249    285     
amn:RAM_22510 SARP family transcriptional regulator                 885     108      30    0.256    285     
amn:RAM_38385 two-component system histidine kinase                 731     108      30    0.253    450     
amn:RAM_46130 ADP-ribosylglycohydrolase                  K05521     331     108      30    0.261    188     
amn:RAM_14610 diguanylate cyclase/phosphodiesterase                 605     107      30    0.311    122     
amn:RAM_17375 major facilitator superfamily transporter  K08167     496     107      30    0.292    192     
amn:RAM_18030 NADPH:quinone reductase and related Zn-de             329     107      30    0.256    238     
amn:RAM_19830 ROK family transcriptional regulator                  372     107      30    0.278    252     
amn:RAM_27890 two-component system sensor kinase                    583     107      30    0.264    182     
amn:RAM_29620 hypothetical protein                                  320     107      30    0.257    284     
amn:RAM_33515 iron ABC transporter permease              K02015     357     107      30    0.288    163     
amn:RAM_37760 hypothetical protein                                 1084     107      30    0.265    268     
amn:RAM_45820 two-component system histidine kinase                 384     107      30    0.234    419     
amn:RAM_07045 ABC transporter permease                   K02004     846     106      30    0.302    351     
amn:RAM_18210 two-component system histidine kinase                 434     106      30    0.265    340     
amn:RAM_18495 hypothetical protein                                  320     106      30    0.292    192     
amn:RAM_30625 NAD-dependent aldehyde dehydrogenase       K14519     484     106      30    0.250    344     
amn:RAM_33105 SARP family transcriptional regulator                 928     106      30    0.262    225     
amn:RAM_35385 heavy metal translocating P-type ATPase    K17686     698     106      30    0.261    303     
amn:RAM_37340 2-dehydropantoate 2-reductase (EC:1.1.1.1  K00077     327     106      30    0.278    115     
amn:RAM_38270 error-prone DNA polymerase (EC:2.7.7.7)    K14162    1109     106      30    0.269    417     
amn:RAM_38295 DNA polymerase                             K14161     458     106      30    0.248    306     
amn:RAM_41160 SARP family transcriptional regulator                 975     106      30    0.259    468     
amn:RAM_09655 chromosome segregation protein SMC         K03529    1200     105      30    0.271    258     
amn:RAM_23425 DNA helicase-like protein                            1137     105      30    0.248    307     
amn:RAM_23730 muramoyltetrapeptide carboxypeptidase      K01297     299     105      30    0.338    133     
amn:RAM_26340 GTPase                                                490     105      30    0.294    231     
amn:RAM_26620 diaminopimelate decarboxylase              K01586     442     105      30    0.294    272     
amn:RAM_27440 hypothetical protein                                  450     105      30    0.248    387     
amn:RAM_29255 two-component system histidine kinase                 454     105      30    0.322    118     
amn:RAM_31265 ABC transporter permease                   K02069     247     105      30    0.277    202     
amn:RAM_34755 xylose isomerase                           K01805     382     105      30    0.262    229     
amn:RAM_37450 chromosome partitioning protein ParB       K03497     370     105      30    0.269    360     
amn:RAM_03825 UDP-N-acetylglucosamine 2-epimerase        K01791     383     104      30    0.274    328     
amn:RAM_04650 serine/threonine protein kinase                       580     104      30    0.228    403     
amn:RAM_08535 glucose dehydrogenase                                 402     104      30    0.256    195     
amn:RAM_14535 hypothetical protein                                  962     104      30    0.298    161     
amn:RAM_15715 sugar ABC transporter ATPase               K02056     499     104      30    0.250    348     
amn:RAM_17600 beta-lactamase class C                                461     104      30    0.249    249     
amn:RAM_19430 3-oxoacyl-ACP reductase                               256     104      30    0.303    122     
amn:RAM_21115 hypothetical protein                                  386     104      30    0.273    161     
amn:RAM_23045 two-component system sensor kinase                   1516     104      30    0.215    368     
amn:RAM_24740 ABC transporter ATP-binding protein        K02003     230     104      30    0.242    223     
amn:RAM_38760 major facilitator superfamily transporter             466     104      30    0.291    175     
amn:RAM_41885 LuxR family transcriptional regulator fus             935     104      30    0.243    485     
amn:RAM_00785 hypothetical protein                                  246     103      29    0.293    157     
amn:RAM_06020 hypothetical protein                                  984     103      29    0.239    238     
amn:RAM_14680 acyl-CoA carboxylase alpha chain           K01965     649     103      29    0.261    165     
amn:RAM_15515 anti-sigma regulatory factor, serine/thre             351     103      29    0.262    279     
amn:RAM_17750 LuxR family transcriptional regulator                 943     103      29    0.322    146     
amn:RAM_20020 NADPH:quinone reductase and related Zn-de             330     103      29    0.258    217     
amn:RAM_21860 FAD-dependent oxidoreductase                          500     103      29    0.300    210     
amn:RAM_24435 non-ribosomal peptide synthetase                     2390     103      29    0.263    525     
amn:RAM_30750 amino acid adenylation domain-containing             1298     103      29    0.248    415     
amn:RAM_39185 hypothetical protein                                  869     103      29    0.243    536     
amn:RAM_03160 rifamycin polyketide synthase              K15671    5060     102      29    0.220    419     
amn:RAM_03305 acyltransferase PapA5                      K16023     403     102      29    0.255    137     
amn:RAM_12455 arsenite-transporting ATPase               K01551     377     102      29    0.254    402     
amn:RAM_21965 SARP family transcriptional regulator fus            1001     102      29    0.285    221     
amn:RAM_24440 lantibiotic dehydratase                               743     102      29    0.262    389     
amn:RAM_24665 ATPase                                                661     102      29    0.280    193     
amn:RAM_25075 major facilitator superfamily transporter             414     102      29    0.292    192     
amn:RAM_25630 non-ribosomal peptide synthetase                     6011     102      29    0.260    373     
amn:RAM_29815 hypothetical protein                                  618     102      29    0.250    200     
amn:RAM_29960 DeoR family transcriptional regulator                 250     102      29    0.262    275     
amn:RAM_32150 hypothetical protein                                  424     102      29    0.270    178     
amn:RAM_36330 hypothetical protein                       K06915     508     102      29    0.235    426     
amn:RAM_43445 ABC transporter permease                   K02004     401     102      29    0.251    379     
amn:RAM_04090 hypothetical protein                                  635     101      29    0.391    92      
amn:RAM_16900 LuxR family transcriptional regulator fus             764     101      29    0.264    144     
amn:RAM_21185 LysR family transcriptional regulator                 299     101      29    0.375    88      
amn:RAM_21335 ATP-dependent DNA ligase                   K01971     525     101      29    0.259    301     
amn:RAM_36685 ferredoxin--NAD+ reductase                            396     101      29    0.325    166     
amn:RAM_37295 hypothetical protein                                  682     101      29    0.228    267     
amn:RAM_47770 phosphotransferase system EI component     K08483     549     101      29    0.287    254     
amn:RAM_08845 D-alanyl-alanine synthetase A (EC:6.3.2.4  K01921     364     100      29    0.273    205     
amn:RAM_10635 NAD(P) transhydrogenase subunit beta       K00325     462     100      29    0.227    185     
amn:RAM_17680 XRE family transcriptional regulator                  282     100      29    0.263    278     
amn:RAM_20810 rieske (2Fe-2S) domain-containing protein             357     100      29    0.248    258     
amn:RAM_30115 coenzyme F420-dependent N5,N10-methenylte             271     100      29    0.243    152     
amn:RAM_38800 sarcosine oxidase subunit alpha            K00302     845     100      29    0.252    218     

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