SSDB Paralog Search Result

KEGG ID :aor:AOR_1_1334054 (892 a.a.)
Definition:DNA ligase Cdc9; K10747 DNA ligase 1
Update status:T01018 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 25 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
aor:AOR_1_1174154 DNA ligase 3                           K10747     827    1315     306    0.327    890     
aor:AOR_1_564094 hypothetical protein                              1822     508     122    0.245    690     
aor:AOR_1_612134 hypothetical protein                               709     260      65    0.225    480     
aor:AOR_1_722084 nucleolin protein Nsr1                  K11294     525     210      54    0.281    210     
aor:AOR_1_878054 MYB DNA-binding domain protein                     670     185      48    0.276    196     
aor:AOR_1_762054 hypothetical protein                               639     177      46    0.284    141     
aor:AOR_1_2372154 S-adenosylmethionine-dependent methyl  K14835     751     176      46    0.284    215     
aor:AOR_1_3216174 hypothetical protein                             1014     176      46    0.269    201     
aor:AOR_1_1698144 rRNA processing protein gar2           K14838     464     174      46    0.261    207     
aor:AOR_1_1034054 SH3 domain protein                               1214     172      45    0.269    212     
aor:AOR_1_720074 hypothetical protein                              2261     168      44    0.261    211     
aor:AOR_1_530014 universal stress protein family domain             670     161      43    0.286    199     
aor:AOR_1_348184 PE repeat family protein                          1328     160      42    0.251    227     
aor:AOR_1_802014 immediate-early protein                 K14770     359     159      42    0.264    174     
aor:AOR_1_964134 hypothetical protein                              2052     156      41    0.258    178     
aor:AOR_1_754184 immunogenic protein                                538     155      41    0.259    174     
aor:AOR_1_92034 AAA family ATPase                                  1661     152      40    0.250    188     
aor:AOR_1_1440194 hypothetical protein                              266     150      40    0.279    140     
aor:AOR_1_630074 protein PUF6                            K14844     698     113      32    0.329    70      
aor:AOR_1_480074 translation elongation factor 1 subuni  K03232     228     112      31    0.380    71      
aor:AOR_1_1256014 AP-3 adaptor complex subunit beta                 830     105      30    0.301    133     
aor:AOR_1_1508144 hypothetical protein                   K12598    1080     105      30    0.329    82      
aor:AOR_1_370084 hypothetical protein                               377     104      30    0.317    82      
aor:AOR_1_1874174 ATP-dependent RNA helicase rok1        K14779     725     103      29    0.315    89      
aor:AOR_1_2010144 hypothetical protein                              483     100      29    0.309    68      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]