SSDB Paralog Search Result

KEGG ID :apn:Asphe3_04250 (842 a.a.)
Definition:ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD ligase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01435 (aalg,acin,acis,aeo,ahg,aht,aoa,apak,boe,boh,bsan,cez,cspf,cup,efv,fha,hcq,labr,leq,maur,mza,pdh,pea,pmad,pros,pstw,sauo,slz,spkc,spse,tab,vne : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 11 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
apn:Asphe3_17720 DNA ligase D                                      340      455 (    -)     110    0.318    286      -> 
apn:Asphe3_38430 DNA polymerase LigD, polymerase domain K01971     414      452 (    -)     109    0.318    283      -> 
apn:Asphe3_38910 ATP-dependent DNA ligase                          358      443 (    -)     107    0.329    337      -> 
apn:Asphe3_41980 ATP-dependent DNA ligase                          339      348 (    -)      85    0.329    316      -> 
apn:Asphe3_27260 ATP-dependent DNA ligase I             K10747     507      346 (    -)      85    0.282    433      -> 
apn:Asphe3_41630 ATP dependent DNA ligase-like protein             256      308 (    -)      76    0.330    230      -> 
apn:Asphe3_21960 ATP dependent DNA ligase-like protein             225      131 (    -)      36    0.392    74       -> 
apn:Asphe3_19730 ComEC/Rec2-related protein             K02238     692      115 (    -)      32    0.323    124      -> 
apn:Asphe3_39680 integral membrane protein MviN         K03980     734      112 (    -)      31    0.378    45       -> 
apn:Asphe3_37290 uncharacterized protein with SCP/PR1 d            555      104 (    -)      30    0.302    116      -> 
apn:Asphe3_22350 protein of unknown function (DUF955)              359      100 (    -)      29    0.316    95       -> 

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