SSDB Paralog Search Result

KEGG ID :ara:Arad_9230 (419 a.a.)
Definition:ribulose bisphosphate carboxylaseoxygenase; K01601 ribulose-bisphosphate carboxylase large chain
Update status:T00850 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ara:Arad_0449 hypothetical protein                       K06894    1838     140      38    0.238    223     
ara:Arad_0213 penicillin binding protein                            790     111      31    0.216    333     
ara:Arad_8562 oligopeptide ABC transporter                          338     109      31    0.281    153     
ara:Arad_4653 N-acetylglucosamine-6-phosphate deacetyla  K01443     386     108      30    0.283    127     
ara:Arad_4285 formate dehydrogenase subunit alpha        K00123     959     107      30    0.269    234     
ara:Arad_0445 phenylalanyl-tRNA synthetase subunit beta  K01890     807     106      30    0.199    437     
ara:Arad_2175 methionine aminopeptidase                             474     105      30    0.244    135     
ara:Arad_4867 TROVE domain-containing protein            K11089     518     105      30    0.234    239     
ara:Arad_4540 hypothetical protein                       K09136     421     103      29    0.224    147     
ara:Arad_0961 hypothetical protein                       K07289     631     100      29    0.229    275     
ara:Arad_12273 chaperonin GroL                           K04077     542     100      29    0.249    181     
ara:Arad_2753 transporter                                K08178     416     100      29    0.236    195     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]