SSDB Paralog Search Result

KEGG ID :ath:AT2G02000 (500 a.a.)
Definition:glutamate decarboxylase 3; K01580 glutamate decarboxylase
Update status:T00041 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ath:AT2G02010 glutamate decarboxylase 4                  K01580     493    3032     697    0.927    492     
ath:AT5G17330 glutamate decarboxylase 1                  K01580     502    2655     611    0.790    501     
ath:AT1G65960 glutamate decarboxylase 2                  K01580     494    2611     601    0.785    494     
ath:AT3G17760 glutamate decarboxylase 5                  K01580     494    2509     578    0.748    492     
ath:AT3G17720 pyridoxal phosphate (PLP)-dependent trans             194     799     188    0.759    162     
ath:AT1G27980 Sphingosine-1-phosphate lyase              K01634     544     319      79    0.242    355     
ath:AT1G43710 serine decarboxylase 1                     K01590     482     184      48    0.219    416     
ath:AT1G33360 ATP-dependent Clp protease                 K03544     656     122      34    0.205    293     
ath:AT5G42590 cytochrome P450 71A16                      K00517     497     120      33    0.370    73      
ath:AT3G61350 SKP1 interacting partner 4                            358     114      32    0.235    166     
ath:AT4G18830 ovate family protein 5                                349     112      31    0.228    316     
ath:AT3G09040 pentatricopeptide repeat-containing prote            1028     108      30    0.215    330     
ath:AT3G21110 phosphoribosylaminoimidazole-succinocarbo  K01923     411     104      30    0.233    202     
ath:AT5G65460 kinesin like protein for actin based chlo            1264     104      30    0.256    117     
ath:AT3G54070 ankyrin repeat-containing protein                     574     103      29    0.324    111     
ath:AT3G60530 GATA transcription factor 4                           240     103      29    0.280    100     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]