SSDB Paralog Search Result

KEGG ID :ath:AT3G17760 (494 a.a.)
Definition:glutamate decarboxylase 5; K01580 glutamate decarboxylase
Update status:T00041 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 14 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ath:AT2G02010 glutamate decarboxylase 4                  K01580     493    2595     597    0.765    498     
ath:AT5G17330 glutamate decarboxylase 1                  K01580     502    2532     583    0.751    502     
ath:AT2G02000 glutamate decarboxylase 3                  K01580     500    2509     578    0.748    492     
ath:AT1G65960 glutamate decarboxylase 2                  K01580     494    2488     573    0.742    497     
ath:AT3G17720 pyridoxal phosphate (PLP)-dependent trans             194     927     217    0.870    162     
ath:AT1G27980 Sphingosine-1-phosphate lyase              K01634     544     360      88    0.257    358     
ath:AT1G43710 serine decarboxylase 1                     K01590     482     176      46    0.236    276     
ath:AT4G11280 1-aminocyclopropane-1-carboxylate synthas  K01762     495     124      34    0.241    386     
ath:AT2G20340 tyrosine decarboxylase 1                   K01592     490     121      33    0.213    399     
ath:AT5G14980 esterase/lipase/thioesterase family prote             327     108      30    0.303    99      
ath:AT4G28680 tyrosine decarboxylase                     K01592     547     107      30    0.208    317     
ath:AT2G47430 histidine kinase CKI1                                1122     103      29    0.257    113     
ath:AT5G35830 ankyrin repeat-containing protein                     282     101      29    0.237    194     
ath:AT5G42590 cytochrome P450 71A16                      K00517     497     100      29    0.338    68      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]