SSDB Paralog Search Result

KEGG ID :ath:AT3G23920 (575 a.a.)
Definition:beta-amylase 1; K01177 beta-amylase
Update status:T00041 (aal,ahp,ahr,aja,amq,asg,ble,bmet,bpsi,bvt,cax,cmn,cmo,ctes,dja,dni,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,nev,ngl,nvn,patr,pch,pmum,ppac,ptp,puf,rbc,rla,slv,tap,tcm,vir,wce : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 17 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ath:AT4G17090 beta-amylase                               K01177     548    1959     452    0.603    463     
ath:AT4G15210 beta-amylase 5                                        498    1491     346    0.499    441     
ath:AT4G00490 beta-amylase 2                             K01177     542    1475     342    0.495    444     
ath:AT2G32290 beta-amylase 6                                        577    1461     339    0.462    461     
ath:AT2G45880 beta-amylase 7                                        691    1269     295    0.395    534     
ath:AT5G45300 beta-amylase 2                                        687    1093     255    0.406    446     
ath:AT5G18670 putative beta-amylase BMY3                            536    1090     254    0.392    454     
ath:AT5G55700 inactive beta-amylase 4                               489    1052     246    0.404    443     
ath:AT3G50370 hypothetical protein                                 2156     135      37    0.291    151     
ath:AT2G33540 RNA polymerase II C-terminal domain phosp            1241     106      30    0.226    279     
ath:AT3G52810 purple acid phosphatase 21                            437     105      30    0.231    264     
ath:AT3G02510 regulator of chromosome condensation doma             310     103      29    0.228    250     
ath:AT5G42950 GYF domain-containing protein                        1714     103      29    0.231    208     
ath:AT3G16560 putative protein phosphatase 2C 40                    493     102      29    0.274    113     
ath:AT4G36360 beta-galactosidase 3                                  856     102      29    0.312    77      
ath:AT5G20870 O-Glycosyl hydrolases family 17 protein               501     102      29    0.215    242     
ath:AT2G18700 putative alpha,alpha-trehalose-phosphate   K16055     862     101      29    0.240    104     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]